Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF253O75346 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF253O75346 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF253O75346 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF253O75346 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC12.29□□□□□ -0.44
ZNF253O75346 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC12.29□□□□□ -0.44
ZNF253O75346 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF253O75346 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF253O75346 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF253O75346 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
ZNF253O75346 MED22-202ENST00000371999 987 ntTSL 3 BASIC12.29□□□□□ -0.44
ZNF253O75346 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
ZNF253O75346 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
ZNF253O75346 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF253O75346 AC108751.1-201ENST00000490852 363 ntBASIC12.29□□□□□ -0.44
ZNF253O75346 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC12.29□□□□□ -0.44
ZNF253O75346 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC12.29□□□□□ -0.44
ZNF253O75346 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
ZNF253O75346 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC12.29□□□□□ -0.44
ZNF253O75346 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC12.29□□□□□ -0.44
ZNF253O75346 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
ZNF253O75346 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC12.29□□□□□ -0.44
ZNF253O75346 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC12.29□□□□□ -0.44
ZNF253O75346 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
ZNF253O75346 AC117500.6-201ENST00000624871 588 ntBASIC12.29□□□□□ -0.44
ZNF253O75346 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF253O75346 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF253O75346 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC12.29□□□□□ -0.44
ZNF253O75346 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF253O75346 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF253O75346 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
ZNF253O75346 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF253O75346 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC12.29□□□□□ -0.44
ZNF253O75346 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF253O75346 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC12.29□□□□□ -0.44
ZNF253O75346 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF253O75346 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF253O75346 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF253O75346 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
ZNF253O75346 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
ZNF253O75346 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC12.28□□□□□ -0.44
ZNF253O75346 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC12.28□□□□□ -0.44
ZNF253O75346 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC12.28□□□□□ -0.44
ZNF253O75346 AC041040.2-201ENST00000622926 2899 ntBASIC12.28□□□□□ -0.44
ZNF253O75346 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF253O75346 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF253O75346 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF253O75346 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC12.28□□□□□ -0.44
ZNF253O75346 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF253O75346 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.28□□□□□ -0.44
ZNF253O75346 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
ZNF253O75346 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF253O75346 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC12.28□□□□□ -0.44
ZNF253O75346 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
ZNF253O75346 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC12.28□□□□□ -0.44
ZNF253O75346 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF253O75346 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC12.28□□□□□ -0.44
ZNF253O75346 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC12.28□□□□□ -0.44
ZNF253O75346 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF253O75346 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF253O75346 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC12.28□□□□□ -0.44
ZNF253O75346 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
ZNF253O75346 AC092474.2-201ENST00000424288 719 ntBASIC12.28□□□□□ -0.44
ZNF253O75346 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF253O75346 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF253O75346 HNRNPDP1-201ENST00000439535 754 ntBASIC12.28□□□□□ -0.44
ZNF253O75346 VN2R19P-201ENST00000442399 1052 ntBASIC12.28□□□□□ -0.44
ZNF253O75346 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC12.28□□□□□ -0.44
ZNF253O75346 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF253O75346 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC12.28□□□□□ -0.44
ZNF253O75346 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF253O75346 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF253O75346 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC12.28□□□□□ -0.44
ZNF253O75346 AC012640.2-201ENST00000561606 901 ntBASIC12.28□□□□□ -0.44
ZNF253O75346 AC002347.1-201ENST00000569543 541 ntBASIC12.28□□□□□ -0.44
ZNF253O75346 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC12.28□□□□□ -0.44
ZNF253O75346 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC12.28□□□□□ -0.44
ZNF253O75346 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
ZNF253O75346 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF253O75346 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC12.28□□□□□ -0.44
ZNF253O75346 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF253O75346 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF253O75346 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.28□□□□□ -0.44
ZNF253O75346 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF253O75346 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
ZNF253O75346 COCH-203ENST00000460581 2688 ntTSL 2 BASIC12.28□□□□□ -0.44
ZNF253O75346 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF253O75346 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF253O75346 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF253O75346 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
ZNF253O75346 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC12.28□□□□□ -0.44
ZNF253O75346 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC12.28□□□□□ -0.44
ZNF253O75346 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF253O75346 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
ZNF253O75346 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
ZNF253O75346 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
ZNF253O75346 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC12.28□□□□□ -0.44
ZNF253O75346 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC12.28□□□□□ -0.44
ZNF253O75346 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
ZNF253O75346 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 103.1 ms