Protein–RNA interactions for Protein: O75112

LDB3, LIM domain-binding protein 3, humanhuman

Predictions only

Length 727 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3O75112 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LDB3O75112 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC14.74□□□□□ -0.05
LDB3O75112 AC002472.2-201ENST00000442739 958 ntBASIC14.74□□□□□ -0.05
LDB3O75112 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.74□□□□□ -0.05
LDB3O75112 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.74□□□□□ -0.05
LDB3O75112 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.74□□□□□ -0.05
LDB3O75112 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC14.74□□□□□ -0.05
LDB3O75112 MEIS3P1-201ENST00000495167 958 ntBASIC14.74□□□□□ -0.05
LDB3O75112 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
LDB3O75112 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LDB3O75112 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LDB3O75112 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.74□□□□□ -0.05
LDB3O75112 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
LDB3O75112 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LDB3O75112 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
LDB3O75112 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
LDB3O75112 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
LDB3O75112 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LDB3O75112 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LDB3O75112 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LDB3O75112 AC073347.1-201ENST00000421633 2643 ntBASIC14.74□□□□□ -0.05
LDB3O75112 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
LDB3O75112 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
LDB3O75112 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
LDB3O75112 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.74□□□□□ -0.05
LDB3O75112 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.73□□□□□ -0.05
LDB3O75112 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
LDB3O75112 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LDB3O75112 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LDB3O75112 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.73□□□□□ -0.05
LDB3O75112 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LDB3O75112 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LDB3O75112 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LDB3O75112 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14.73□□□□□ -0.05
LDB3O75112 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LDB3O75112 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LDB3O75112 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LDB3O75112 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LDB3O75112 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.73□□□□□ -0.05
LDB3O75112 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.73□□□□□ -0.05
LDB3O75112 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.73□□□□□ -0.05
LDB3O75112 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LDB3O75112 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LDB3O75112 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.73□□□□□ -0.05
LDB3O75112 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LDB3O75112 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.73□□□□□ -0.05
LDB3O75112 TOMM22P5-201ENST00000416399 439 ntBASIC14.73□□□□□ -0.05
LDB3O75112 SPTLC1P1-201ENST00000447199 261 ntBASIC14.73□□□□□ -0.05
LDB3O75112 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LDB3O75112 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LDB3O75112 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LDB3O75112 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.73□□□□□ -0.05
LDB3O75112 TPRX2P-201ENST00000535362 881 ntBASIC14.73□□□□□ -0.05
LDB3O75112 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.73□□□□□ -0.05
LDB3O75112 AC023310.3-201ENST00000557027 670 ntBASIC14.73□□□□□ -0.05
LDB3O75112 AC100756.1-201ENST00000562736 682 ntBASIC14.73□□□□□ -0.05
LDB3O75112 AC138749.3-201ENST00000567691 622 ntBASIC14.73□□□□□ -0.05
LDB3O75112 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.73□□□□□ -0.05
LDB3O75112 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC14.73□□□□□ -0.05
LDB3O75112 AC116165.1-201ENST00000611806 668 ntBASIC14.73□□□□□ -0.05
LDB3O75112 AC008761.3-201ENST00000624803 892 ntBASIC14.73□□□□□ -0.05
LDB3O75112 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
LDB3O75112 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LDB3O75112 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LDB3O75112 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
LDB3O75112 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC14.73□□□□□ -0.05
LDB3O75112 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
LDB3O75112 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LDB3O75112 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LDB3O75112 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
LDB3O75112 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LDB3O75112 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LDB3O75112 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.73□□□□□ -0.05
LDB3O75112 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LDB3O75112 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
LDB3O75112 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
LDB3O75112 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
LDB3O75112 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC14.73□□□□□ -0.05
LDB3O75112 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LDB3O75112 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
LDB3O75112 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LDB3O75112 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.72□□□□□ -0.05
LDB3O75112 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LDB3O75112 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
LDB3O75112 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.72□□□□□ -0.05
LDB3O75112 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.72□□□□□ -0.05
LDB3O75112 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LDB3O75112 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LDB3O75112 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LDB3O75112 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LDB3O75112 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.72□□□□□ -0.05
LDB3O75112 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LDB3O75112 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
LDB3O75112 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.72□□□□□ -0.05
LDB3O75112 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
LDB3O75112 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
LDB3O75112 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.72□□□□□ -0.05
LDB3O75112 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC14.72□□□□□ -0.05
LDB3O75112 FAM207CP-201ENST00000443486 507 ntBASIC14.72□□□□□ -0.05
LDB3O75112 OARD1-208ENST00000469104 704 ntTSL 2 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms