Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZIC3O60481 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.03□□□□□ -0.16
ZIC3O60481 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ZIC3O60481 AC132872.4-202ENST00000622924 2756 ntBASIC14.03□□□□□ -0.16
ZIC3O60481 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZIC3O60481 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZIC3O60481 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZIC3O60481 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZIC3O60481 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZIC3O60481 C1QBPP1-201ENST00000400117 770 ntBASIC14.03□□□□□ -0.16
ZIC3O60481 AL512384.1-201ENST00000406683 331 ntBASIC14.03□□□□□ -0.16
ZIC3O60481 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZIC3O60481 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ZIC3O60481 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.03□□□□□ -0.16
ZIC3O60481 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.03□□□□□ -0.16
ZIC3O60481 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.03□□□□□ -0.16
ZIC3O60481 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.03□□□□□ -0.16
ZIC3O60481 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.03□□□□□ -0.16
ZIC3O60481 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.03□□□□□ -0.16
ZIC3O60481 ENPP7P5-201ENST00000541031 1031 ntBASIC14.03□□□□□ -0.16
ZIC3O60481 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.03□□□□□ -0.16
ZIC3O60481 AC093813.1-201ENST00000605066 256 ntBASIC14.03□□□□□ -0.16
ZIC3O60481 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
ZIC3O60481 IGHV3-72-202ENST00000621503 303 ntBASIC14.03□□□□□ -0.16
ZIC3O60481 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14.03□□□□□ -0.16
ZIC3O60481 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.03□□□□□ -0.16
ZIC3O60481 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.03□□□□□ -0.16
ZIC3O60481 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZIC3O60481 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZIC3O60481 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ZIC3O60481 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZIC3O60481 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ZIC3O60481 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZIC3O60481 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZIC3O60481 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZIC3O60481 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.03□□□□□ -0.16
ZIC3O60481 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC14.03□□□□□ -0.16
ZIC3O60481 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC14.03□□□□□ -0.16
ZIC3O60481 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ZIC3O60481 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC14.03□□□□□ -0.16
ZIC3O60481 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ZIC3O60481 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZIC3O60481 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZIC3O60481 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZIC3O60481 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ZIC3O60481 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZIC3O60481 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ZIC3O60481 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ZIC3O60481 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ZIC3O60481 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.02□□□□□ -0.16
ZIC3O60481 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ZIC3O60481 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC14.02□□□□□ -0.16
ZIC3O60481 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ZIC3O60481 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC14.02□□□□□ -0.16
ZIC3O60481 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ZIC3O60481 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ZIC3O60481 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ZIC3O60481 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
ZIC3O60481 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ZIC3O60481 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZIC3O60481 RPL5P21-201ENST00000404620 815 ntBASIC14.02□□□□□ -0.17
ZIC3O60481 SOCS2P1-201ENST00000417727 557 ntBASIC14.02□□□□□ -0.17
ZIC3O60481 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC14.02□□□□□ -0.17
ZIC3O60481 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.02□□□□□ -0.17
ZIC3O60481 AC107373.2-201ENST00000607735 490 ntBASIC14.02□□□□□ -0.17
ZIC3O60481 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC14.02□□□□□ -0.17
ZIC3O60481 RPSAP52-203ENST00000622976 1023 ntBASIC14.02□□□□□ -0.17
ZIC3O60481 CU634019.7-201ENST00000624153 1185 ntBASIC14.02□□□□□ -0.17
ZIC3O60481 FP236241.2-201ENST00000624906 1185 ntBASIC14.02□□□□□ -0.17
ZIC3O60481 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZIC3O60481 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZIC3O60481 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZIC3O60481 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZIC3O60481 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ZIC3O60481 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ZIC3O60481 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ZIC3O60481 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZIC3O60481 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZIC3O60481 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ZIC3O60481 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ZIC3O60481 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZIC3O60481 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC14.02□□□□□ -0.17
ZIC3O60481 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ZIC3O60481 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
ZIC3O60481 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.01□□□□□ -0.17
ZIC3O60481 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
ZIC3O60481 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZIC3O60481 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZIC3O60481 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
ZIC3O60481 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.01□□□□□ -0.17
ZIC3O60481 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZIC3O60481 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC14.01□□□□□ -0.17
ZIC3O60481 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.01□□□□□ -0.17
ZIC3O60481 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
ZIC3O60481 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZIC3O60481 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.01□□□□□ -0.17
ZIC3O60481 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.01□□□□□ -0.17
ZIC3O60481 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZIC3O60481 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZIC3O60481 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms