Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC14.01□□□□□ -0.17
CXCL13O43927 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL13O43927 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.01□□□□□ -0.17
CXCL13O43927 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.01□□□□□ -0.17
CXCL13O43927 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL13O43927 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL13O43927 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL13O43927 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL13O43927 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CXCL13O43927 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14□□□□□ -0.17
CXCL13O43927 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CXCL13O43927 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC14□□□□□ -0.17
CXCL13O43927 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CXCL13O43927 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC14□□□□□ -0.17
CXCL13O43927 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CXCL13O43927 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CXCL13O43927 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CXCL13O43927 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14□□□□□ -0.17
CXCL13O43927 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CXCL13O43927 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CXCL13O43927 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CXCL13O43927 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14□□□□□ -0.17
CXCL13O43927 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CXCL13O43927 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14□□□□□ -0.17
CXCL13O43927 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14□□□□□ -0.17
CXCL13O43927 RN7SL692P-201ENST00000464677 288 ntBASIC14□□□□□ -0.17
CXCL13O43927 ELK1P1-201ENST00000485699 580 ntBASIC14□□□□□ -0.17
CXCL13O43927 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14□□□□□ -0.17
CXCL13O43927 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC14□□□□□ -0.17
CXCL13O43927 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14□□□□□ -0.17
CXCL13O43927 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC14□□□□□ -0.17
CXCL13O43927 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14□□□□□ -0.17
CXCL13O43927 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14□□□□□ -0.17
CXCL13O43927 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14□□□□□ -0.17
CXCL13O43927 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CXCL13O43927 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CXCL13O43927 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
CXCL13O43927 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14□□□□□ -0.17
CXCL13O43927 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CXCL13O43927 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14□□□□□ -0.17
CXCL13O43927 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
CXCL13O43927 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC14□□□□□ -0.17
CXCL13O43927 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
CXCL13O43927 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CXCL13O43927 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC13.99□□□□□ -0.17
CXCL13O43927 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CXCL13O43927 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC13.99□□□□□ -0.17
CXCL13O43927 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CXCL13O43927 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CXCL13O43927 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
CXCL13O43927 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CXCL13O43927 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.99□□□□□ -0.17
CXCL13O43927 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CXCL13O43927 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CXCL13O43927 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC13.99□□□□□ -0.17
CXCL13O43927 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CXCL13O43927 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CXCL13O43927 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.99□□□□□ -0.17
CXCL13O43927 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CXCL13O43927 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CXCL13O43927 METTL26-204ENST00000397665 558 ntTSL 2 BASIC13.99□□□□□ -0.17
CXCL13O43927 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
CXCL13O43927 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.99□□□□□ -0.17
CXCL13O43927 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.99□□□□□ -0.17
CXCL13O43927 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CXCL13O43927 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC13.99□□□□□ -0.17
CXCL13O43927 CTBP2P3-201ENST00000585629 1255 ntBASIC13.99□□□□□ -0.17
CXCL13O43927 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC13.99□□□□□ -0.17
CXCL13O43927 CECR7-204ENST00000609932 568 ntTSL 2 BASIC13.99□□□□□ -0.17
CXCL13O43927 AL358472.5-202ENST00000641448 1267 ntBASIC13.99□□□□□ -0.17
CXCL13O43927 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.99□□□□□ -0.17
CXCL13O43927 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CXCL13O43927 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CXCL13O43927 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CXCL13O43927 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CXCL13O43927 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CXCL13O43927 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CXCL13O43927 AC009090.5-201ENST00000624886 2285 ntBASIC13.99□□□□□ -0.17
CXCL13O43927 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC13.99□□□□□ -0.17
CXCL13O43927 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CXCL13O43927 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CXCL13O43927 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC13.99□□□□□ -0.17
CXCL13O43927 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CXCL13O43927 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CXCL13O43927 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CXCL13O43927 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CXCL13O43927 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CXCL13O43927 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CXCL13O43927 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CXCL13O43927 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CXCL13O43927 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CXCL13O43927 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC13.98□□□□□ -0.17
CXCL13O43927 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CXCL13O43927 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC13.98□□□□□ -0.17
CXCL13O43927 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CXCL13O43927 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC13.98□□□□□ -0.17
CXCL13O43927 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CXCL13O43927 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CXCL13O43927 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CXCL13O43927 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms