Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 AC211476.1-201ENST00000503899 468 ntBASIC14.33□□□□□ -0.12
RNF13O43567 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.33□□□□□ -0.12
RNF13O43567 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC14.33□□□□□ -0.12
RNF13O43567 DHDH-204ENST00000523250 634 ntTSL 5 BASIC14.33□□□□□ -0.12
RNF13O43567 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.33□□□□□ -0.12
RNF13O43567 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC14.33□□□□□ -0.12
RNF13O43567 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RNF13O43567 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC14.33□□□□□ -0.12
RNF13O43567 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RNF13O43567 AC105250.1-201ENST00000509378 2057 ntBASIC14.33□□□□□ -0.12
RNF13O43567 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.33□□□□□ -0.12
RNF13O43567 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF13O43567 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF13O43567 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF13O43567 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF13O43567 AC092127.1-201ENST00000567093 3455 ntBASIC14.33□□□□□ -0.12
RNF13O43567 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RNF13O43567 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF13O43567 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
RNF13O43567 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.33□□□□□ -0.12
RNF13O43567 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
RNF13O43567 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RNF13O43567 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RNF13O43567 KRT8P37-201ENST00000451609 1420 ntBASIC14.32□□□□□ -0.12
RNF13O43567 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RNF13O43567 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
RNF13O43567 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RNF13O43567 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RNF13O43567 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.32□□□□□ -0.12
RNF13O43567 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
RNF13O43567 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
RNF13O43567 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.32□□□□□ -0.12
RNF13O43567 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.32□□□□□ -0.12
RNF13O43567 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.32□□□□□ -0.12
RNF13O43567 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.32□□□□□ -0.12
RNF13O43567 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RNF13O43567 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RNF13O43567 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RNF13O43567 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RNF13O43567 LINC01101-201ENST00000622953 1884 ntBASIC14.32□□□□□ -0.12
RNF13O43567 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
RNF13O43567 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
RNF13O43567 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC14.32□□□□□ -0.12
RNF13O43567 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.32□□□□□ -0.12
RNF13O43567 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC14.32□□□□□ -0.12
RNF13O43567 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
RNF13O43567 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.32□□□□□ -0.12
RNF13O43567 AL450472.2-201ENST00000603663 1156 ntBASIC14.32□□□□□ -0.12
RNF13O43567 AC003101.2-201ENST00000612557 442 ntBASIC14.32□□□□□ -0.12
RNF13O43567 AC018529.1-201ENST00000613063 361 ntBASIC14.32□□□□□ -0.12
RNF13O43567 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RNF13O43567 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RNF13O43567 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RNF13O43567 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RNF13O43567 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
RNF13O43567 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
RNF13O43567 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
RNF13O43567 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RNF13O43567 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC14.32□□□□□ -0.12
RNF13O43567 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RNF13O43567 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.32□□□□□ -0.12
RNF13O43567 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.32□□□□□ -0.12
RNF13O43567 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RNF13O43567 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RNF13O43567 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RNF13O43567 AC007292.2-201ENST00000593524 1812 ntBASIC14.31□□□□□ -0.12
RNF13O43567 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RNF13O43567 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
RNF13O43567 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
RNF13O43567 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RNF13O43567 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
RNF13O43567 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.31□□□□□ -0.12
RNF13O43567 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RNF13O43567 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RNF13O43567 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RNF13O43567 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC14.31□□□□□ -0.12
RNF13O43567 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
RNF13O43567 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RNF13O43567 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RNF13O43567 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.31□□□□□ -0.12
RNF13O43567 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RNF13O43567 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
RNF13O43567 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC14.31□□□□□ -0.12
RNF13O43567 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.31□□□□□ -0.12
RNF13O43567 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC14.31□□□□□ -0.12
RNF13O43567 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.31□□□□□ -0.12
RNF13O43567 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.31□□□□□ -0.12
RNF13O43567 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC14.31□□□□□ -0.12
RNF13O43567 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.31□□□□□ -0.12
RNF13O43567 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.31□□□□□ -0.12
RNF13O43567 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.31□□□□□ -0.12
RNF13O43567 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC14.31□□□□□ -0.12
RNF13O43567 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC14.31□□□□□ -0.12
RNF13O43567 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.31□□□□□ -0.12
RNF13O43567 AC023908.3-201ENST00000564211 3047 ntBASIC14.31□□□□□ -0.12
RNF13O43567 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RNF13O43567 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RNF13O43567 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RNF13O43567 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
RNF13O43567 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms