Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
XRCC2O43543 DNAJB3-202ENST00000449667 1266 ntBASIC13.67□□□□□ -0.22
XRCC2O43543 CNN2P3-201ENST00000450201 906 ntBASIC13.67□□□□□ -0.22
XRCC2O43543 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC13.67□□□□□ -0.22
XRCC2O43543 HLA-J-203ENST00000494367 1087 ntBASIC13.67□□□□□ -0.22
XRCC2O43543 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
XRCC2O43543 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC13.67□□□□□ -0.22
XRCC2O43543 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC13.67□□□□□ -0.22
XRCC2O43543 AL079307.3-201ENST00000556114 283 ntBASIC13.67□□□□□ -0.22
XRCC2O43543 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.67□□□□□ -0.22
XRCC2O43543 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.67□□□□□ -0.22
XRCC2O43543 AC027612.4-201ENST00000605371 583 ntBASIC13.67□□□□□ -0.22
XRCC2O43543 AL136317.3-201ENST00000618497 906 ntBASIC13.67□□□□□ -0.22
XRCC2O43543 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
XRCC2O43543 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.67□□□□□ -0.22
XRCC2O43543 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.67□□□□□ -0.22
XRCC2O43543 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
XRCC2O43543 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
XRCC2O43543 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
XRCC2O43543 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
XRCC2O43543 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
XRCC2O43543 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
XRCC2O43543 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
XRCC2O43543 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
XRCC2O43543 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
XRCC2O43543 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
XRCC2O43543 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
XRCC2O43543 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
XRCC2O43543 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
XRCC2O43543 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC13.67□□□□□ -0.22
XRCC2O43543 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
XRCC2O43543 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
XRCC2O43543 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
XRCC2O43543 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
XRCC2O43543 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
XRCC2O43543 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.66□□□□□ -0.22
XRCC2O43543 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
XRCC2O43543 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.66□□□□□ -0.22
XRCC2O43543 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
XRCC2O43543 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
XRCC2O43543 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
XRCC2O43543 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
XRCC2O43543 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.66□□□□□ -0.22
XRCC2O43543 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
XRCC2O43543 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
XRCC2O43543 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.66□□□□□ -0.22
XRCC2O43543 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
XRCC2O43543 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
XRCC2O43543 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
XRCC2O43543 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
XRCC2O43543 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
XRCC2O43543 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
XRCC2O43543 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
XRCC2O43543 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
XRCC2O43543 HNRNPFP1-201ENST00000391730 1133 ntBASIC13.66□□□□□ -0.22
XRCC2O43543 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
XRCC2O43543 TSEN15P1-201ENST00000423257 515 ntBASIC13.66□□□□□ -0.22
XRCC2O43543 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC13.66□□□□□ -0.22
XRCC2O43543 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
XRCC2O43543 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
XRCC2O43543 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.66□□□□□ -0.22
XRCC2O43543 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.66□□□□□ -0.22
XRCC2O43543 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
XRCC2O43543 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC13.66□□□□□ -0.22
XRCC2O43543 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC13.66□□□□□ -0.22
XRCC2O43543 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC13.66□□□□□ -0.22
XRCC2O43543 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
XRCC2O43543 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.66□□□□□ -0.22
XRCC2O43543 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
XRCC2O43543 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC13.66□□□□□ -0.22
XRCC2O43543 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.66□□□□□ -0.22
XRCC2O43543 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
XRCC2O43543 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.66□□□□□ -0.22
XRCC2O43543 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
XRCC2O43543 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
XRCC2O43543 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
XRCC2O43543 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.66□□□□□ -0.22
XRCC2O43543 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
XRCC2O43543 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
XRCC2O43543 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
XRCC2O43543 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
XRCC2O43543 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC13.66□□□□□ -0.22
XRCC2O43543 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
XRCC2O43543 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
XRCC2O43543 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC13.66□□□□□ -0.22
XRCC2O43543 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
XRCC2O43543 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
XRCC2O43543 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
XRCC2O43543 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.66□□□□□ -0.22
XRCC2O43543 AL607033.1-201ENST00000623900 1599 ntBASIC13.66□□□□□ -0.22
XRCC2O43543 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
XRCC2O43543 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
XRCC2O43543 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.66□□□□□ -0.22
XRCC2O43543 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.66□□□□□ -0.22
XRCC2O43543 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
XRCC2O43543 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
XRCC2O43543 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
XRCC2O43543 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
XRCC2O43543 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
XRCC2O43543 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms