Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2A1O14983 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2A1O14983 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.84■□□□□ 0.45
ATP2A1O14983 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC17.84■□□□□ 0.45
ATP2A1O14983 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2A1O14983 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2A1O14983 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
ATP2A1O14983 APOC3-202ENST00000375345 604 ntTSL 5 BASIC17.84■□□□□ 0.45
ATP2A1O14983 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2A1O14983 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC17.84■□□□□ 0.45
ATP2A1O14983 C2orf27AP3-201ENST00000434123 579 ntBASIC17.84■□□□□ 0.45
ATP2A1O14983 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2A1O14983 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2A1O14983 RPL8-205ENST00000527914 551 ntTSL 3 BASIC17.84■□□□□ 0.45
ATP2A1O14983 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2A1O14983 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC17.84■□□□□ 0.45
ATP2A1O14983 MIR4525-201ENST00000580000 75 ntBASIC17.84■□□□□ 0.45
ATP2A1O14983 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC17.84■□□□□ 0.45
ATP2A1O14983 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC17.84■□□□□ 0.45
ATP2A1O14983 AL354718.3-201ENST00000616414 581 ntBASIC17.84■□□□□ 0.45
ATP2A1O14983 MIR6869-201ENST00000619434 62 ntBASIC17.84■□□□□ 0.45
ATP2A1O14983 CR382287.1-201ENST00000623954 586 ntBASIC17.84■□□□□ 0.45
ATP2A1O14983 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.84■□□□□ 0.45
ATP2A1O14983 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
ATP2A1O14983 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.84■□□□□ 0.45
ATP2A1O14983 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2A1O14983 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2A1O14983 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2A1O14983 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2A1O14983 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.84■□□□□ 0.45
ATP2A1O14983 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
ATP2A1O14983 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
ATP2A1O14983 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC17.83■□□□□ 0.45
ATP2A1O14983 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
ATP2A1O14983 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC17.83■□□□□ 0.45
ATP2A1O14983 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
ATP2A1O14983 LINC02447-202ENST00000501888 2146 ntBASIC17.83■□□□□ 0.45
ATP2A1O14983 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2A1O14983 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC17.83■□□□□ 0.44
ATP2A1O14983 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.83■□□□□ 0.44
ATP2A1O14983 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2A1O14983 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2A1O14983 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC17.83■□□□□ 0.44
ATP2A1O14983 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2A1O14983 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2A1O14983 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.44
ATP2A1O14983 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.83■□□□□ 0.44
ATP2A1O14983 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC17.83■□□□□ 0.44
ATP2A1O14983 AC026954.1-201ENST00000429771 1293 ntBASIC17.83■□□□□ 0.44
ATP2A1O14983 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
ATP2A1O14983 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
ATP2A1O14983 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC17.83■□□□□ 0.44
ATP2A1O14983 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.83■□□□□ 0.44
ATP2A1O14983 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
ATP2A1O14983 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2A1O14983 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2A1O14983 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
ATP2A1O14983 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2A1O14983 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2A1O14983 AL138709.1-201ENST00000614840 1693 ntBASIC17.83■□□□□ 0.44
ATP2A1O14983 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2A1O14983 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2A1O14983 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ATP2A1O14983 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
ATP2A1O14983 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
ATP2A1O14983 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC17.83■□□□□ 0.44
ATP2A1O14983 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2A1O14983 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2A1O14983 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2A1O14983 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2A1O14983 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.82■□□□□ 0.44
ATP2A1O14983 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.82■□□□□ 0.44
ATP2A1O14983 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2A1O14983 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2A1O14983 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC17.82■□□□□ 0.44
ATP2A1O14983 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
ATP2A1O14983 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.82■□□□□ 0.44
ATP2A1O14983 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.82■□□□□ 0.44
ATP2A1O14983 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC17.82■□□□□ 0.44
ATP2A1O14983 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2A1O14983 AC006001.1-201ENST00000325130 474 ntBASIC17.82■□□□□ 0.44
ATP2A1O14983 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2A1O14983 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC17.82■□□□□ 0.44
ATP2A1O14983 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
ATP2A1O14983 YBX1P6-201ENST00000442962 1002 ntBASIC17.82■□□□□ 0.44
ATP2A1O14983 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC17.82■□□□□ 0.44
ATP2A1O14983 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC17.82■□□□□ 0.44
ATP2A1O14983 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC17.82■□□□□ 0.44
ATP2A1O14983 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC17.82■□□□□ 0.44
ATP2A1O14983 KRT18P25-201ENST00000508931 1278 ntBASIC17.82■□□□□ 0.44
ATP2A1O14983 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC17.82■□□□□ 0.44
ATP2A1O14983 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC17.82■□□□□ 0.44
ATP2A1O14983 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC17.82■□□□□ 0.44
ATP2A1O14983 MIR4538-201ENST00000581377 78 ntBASIC17.82■□□□□ 0.44
ATP2A1O14983 AC132938.4-201ENST00000623835 848 ntBASIC17.82■□□□□ 0.44
ATP2A1O14983 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.82■□□□□ 0.44
ATP2A1O14983 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ATP2A1O14983 AC018695.7-201ENST00000624587 2492 ntBASIC17.82■□□□□ 0.44
ATP2A1O14983 FLJ16779-201ENST00000612722 7638 ntBASIC17.82■□□□□ 0.44
ATP2A1O14983 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms