Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
CHL1O00533 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHL1O00533 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHL1O00533 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CHL1O00533 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC19.91■□□□□ 0.78
CHL1O00533 C18orf15-201ENST00000623680 2534 ntBASIC19.91■□□□□ 0.78
CHL1O00533 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC19.91■□□□□ 0.78
CHL1O00533 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHL1O00533 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHL1O00533 LBX2-201ENST00000341396 886 ntTSL 3 BASIC19.91■□□□□ 0.78
CHL1O00533 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHL1O00533 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC19.91■□□□□ 0.78
CHL1O00533 B9D1-203ENST00000395615 805 ntTSL 3 BASIC19.91■□□□□ 0.78
CHL1O00533 ACTBP8-201ENST00000403258 1108 ntBASIC19.91■□□□□ 0.78
CHL1O00533 AL139094.1-201ENST00000405549 1188 ntBASIC19.91■□□□□ 0.78
CHL1O00533 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC19.91■□□□□ 0.78
CHL1O00533 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHL1O00533 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CHL1O00533 FTH1P14-201ENST00000482930 551 ntBASIC19.91■□□□□ 0.78
CHL1O00533 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CHL1O00533 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC19.91■□□□□ 0.78
CHL1O00533 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC19.91■□□□□ 0.78
CHL1O00533 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC19.91■□□□□ 0.78
CHL1O00533 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC19.91■□□□□ 0.78
CHL1O00533 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHL1O00533 KRT8P44-201ENST00000441609 1350 ntBASIC19.91■□□□□ 0.78
CHL1O00533 LCK-206ENST00000373564 2137 ntTSL 5 BASIC19.91■□□□□ 0.78
CHL1O00533 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHL1O00533 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHL1O00533 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHL1O00533 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC19.91■□□□□ 0.78
CHL1O00533 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
CHL1O00533 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHL1O00533 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CHL1O00533 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC19.9■□□□□ 0.78
CHL1O00533 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHL1O00533 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC19.9■□□□□ 0.78
CHL1O00533 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHL1O00533 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.9■□□□□ 0.78
CHL1O00533 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC19.9■□□□□ 0.78
CHL1O00533 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC19.9■□□□□ 0.78
CHL1O00533 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CHL1O00533 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC19.9■□□□□ 0.78
CHL1O00533 AC105917.1-201ENST00000506637 2539 ntBASIC19.9■□□□□ 0.78
CHL1O00533 KRT43P-201ENST00000434019 910 ntBASIC19.9■□□□□ 0.78
CHL1O00533 AL355864.2-201ENST00000447420 863 ntBASIC19.9■□□□□ 0.78
CHL1O00533 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHL1O00533 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC19.9■□□□□ 0.78
CHL1O00533 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC19.9■□□□□ 0.78
CHL1O00533 AP000812.2-201ENST00000538934 718 ntBASIC19.9■□□□□ 0.78
CHL1O00533 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHL1O00533 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC19.9■□□□□ 0.78
CHL1O00533 AC017083.2-201ENST00000608069 979 ntBASIC19.9■□□□□ 0.78
CHL1O00533 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHL1O00533 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHL1O00533 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC19.9■□□□□ 0.78
CHL1O00533 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC19.9■□□□□ 0.78
CHL1O00533 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC19.9■□□□□ 0.78
CHL1O00533 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CHL1O00533 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHL1O00533 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHL1O00533 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHL1O00533 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHL1O00533 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC19.9■□□□□ 0.78
CHL1O00533 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
CHL1O00533 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
CHL1O00533 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHL1O00533 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHL1O00533 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CHL1O00533 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHL1O00533 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CHL1O00533 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CHL1O00533 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CHL1O00533 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC19.89■□□□□ 0.78
CHL1O00533 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
CHL1O00533 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHL1O00533 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHL1O00533 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CHL1O00533 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CHL1O00533 STRN-202ENST00000379213 2254 ntTSL 5 BASIC19.89■□□□□ 0.77
CHL1O00533 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC19.89■□□□□ 0.77
CHL1O00533 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CHL1O00533 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CHL1O00533 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHL1O00533 BOLA2P3-201ENST00000404566 256 ntBASIC19.89■□□□□ 0.77
CHL1O00533 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CHL1O00533 LSM5-207ENST00000410044 687 ntTSL 3 BASIC19.89■□□□□ 0.77
CHL1O00533 HLA-K-203ENST00000430151 1046 ntBASIC19.89■□□□□ 0.77
CHL1O00533 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CHL1O00533 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC19.89■□□□□ 0.77
CHL1O00533 AC007551.1-201ENST00000457394 519 ntBASIC19.89■□□□□ 0.77
CHL1O00533 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC19.89■□□□□ 0.77
CHL1O00533 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CHL1O00533 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC19.89■□□□□ 0.77
CHL1O00533 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CHL1O00533 AC025279.2-201ENST00000569730 653 ntBASIC19.89■□□□□ 0.77
CHL1O00533 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC19.89■□□□□ 0.77
CHL1O00533 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC19.89■□□□□ 0.77
CHL1O00533 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC19.89■□□□□ 0.77
CHL1O00533 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms