Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.67□□□□□ -0.06
TCRBV3S1A0A5B6 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
TCRBV3S1A0A5B6 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
TCRBV3S1A0A5B6 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
TCRBV3S1A0A5B6 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TCRBV3S1A0A5B6 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TCRBV3S1A0A5B6 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TCRBV3S1A0A5B6 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TCRBV3S1A0A5B6 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TCRBV3S1A0A5B6 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TCRBV3S1A0A5B6 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
TCRBV3S1A0A5B6 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
TCRBV3S1A0A5B6 AC018442.1-201ENST00000421439 2061 ntBASIC14.67□□□□□ -0.06
TCRBV3S1A0A5B6 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC14.67□□□□□ -0.06
TCRBV3S1A0A5B6 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TCRBV3S1A0A5B6 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TCRBV3S1A0A5B6 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.66□□□□□ -0.06
TCRBV3S1A0A5B6 FOXO1B-201ENST00000504678 1527 ntBASIC14.66□□□□□ -0.06
TCRBV3S1A0A5B6 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TCRBV3S1A0A5B6 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.66□□□□□ -0.06
TCRBV3S1A0A5B6 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TCRBV3S1A0A5B6 AC079781.5-202ENST00000641784 3743 ntBASIC14.66□□□□□ -0.06
TCRBV3S1A0A5B6 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
TCRBV3S1A0A5B6 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TCRBV3S1A0A5B6 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TCRBV3S1A0A5B6 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TCRBV3S1A0A5B6 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TCRBV3S1A0A5B6 CYP4F24P-201ENST00000586049 1580 ntBASIC14.66□□□□□ -0.06
TCRBV3S1A0A5B6 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.66□□□□□ -0.06
TCRBV3S1A0A5B6 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
TCRBV3S1A0A5B6 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC14.66□□□□□ -0.06
TCRBV3S1A0A5B6 AC136604.1-201ENST00000418535 575 ntBASIC14.66□□□□□ -0.06
TCRBV3S1A0A5B6 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC14.66□□□□□ -0.06
TCRBV3S1A0A5B6 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TCRBV3S1A0A5B6 AC091304.2-201ENST00000564639 760 ntBASIC14.66□□□□□ -0.06
TCRBV3S1A0A5B6 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.66□□□□□ -0.06
TCRBV3S1A0A5B6 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC14.66□□□□□ -0.06
TCRBV3S1A0A5B6 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
TCRBV3S1A0A5B6 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TCRBV3S1A0A5B6 SPTSSB-204ENST00000617024 1292 ntBASIC14.66□□□□□ -0.06
TCRBV3S1A0A5B6 AL358472.4-201ENST00000633140 710 ntBASIC14.66□□□□□ -0.06
TCRBV3S1A0A5B6 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TCRBV3S1A0A5B6 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TCRBV3S1A0A5B6 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TCRBV3S1A0A5B6 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TCRBV3S1A0A5B6 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TCRBV3S1A0A5B6 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
TCRBV3S1A0A5B6 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TCRBV3S1A0A5B6 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TCRBV3S1A0A5B6 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TCRBV3S1A0A5B6 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.66□□□□□ -0.06
TCRBV3S1A0A5B6 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TCRBV3S1A0A5B6 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TCRBV3S1A0A5B6 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TCRBV3S1A0A5B6 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
TCRBV3S1A0A5B6 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TCRBV3S1A0A5B6 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TCRBV3S1A0A5B6 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TCRBV3S1A0A5B6 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TCRBV3S1A0A5B6 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.66□□□□□ -0.06
TCRBV3S1A0A5B6 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.66□□□□□ -0.06
TCRBV3S1A0A5B6 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TCRBV3S1A0A5B6 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.66□□□□□ -0.06
TCRBV3S1A0A5B6 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC14.65□□□□□ -0.06
TCRBV3S1A0A5B6 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
TCRBV3S1A0A5B6 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TCRBV3S1A0A5B6 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.65□□□□□ -0.06
TCRBV3S1A0A5B6 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
TCRBV3S1A0A5B6 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
TCRBV3S1A0A5B6 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TCRBV3S1A0A5B6 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TCRBV3S1A0A5B6 AL607033.1-201ENST00000623900 1599 ntBASIC14.65□□□□□ -0.06
TCRBV3S1A0A5B6 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14.65□□□□□ -0.06
TCRBV3S1A0A5B6 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TCRBV3S1A0A5B6 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TCRBV3S1A0A5B6 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TCRBV3S1A0A5B6 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TCRBV3S1A0A5B6 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.65□□□□□ -0.06
TCRBV3S1A0A5B6 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.65□□□□□ -0.06
TCRBV3S1A0A5B6 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
TCRBV3S1A0A5B6 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
TCRBV3S1A0A5B6 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
TCRBV3S1A0A5B6 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
TCRBV3S1A0A5B6 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.65□□□□□ -0.06
TCRBV3S1A0A5B6 RHOQP3-201ENST00000437982 621 ntBASIC14.65□□□□□ -0.06
TCRBV3S1A0A5B6 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14.65□□□□□ -0.06
TCRBV3S1A0A5B6 RNPS1P1-201ENST00000507437 918 ntBASIC14.65□□□□□ -0.06
TCRBV3S1A0A5B6 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.65□□□□□ -0.06
TCRBV3S1A0A5B6 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TCRBV3S1A0A5B6 AC117500.6-201ENST00000624871 588 ntBASIC14.65□□□□□ -0.06
TCRBV3S1A0A5B6 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
TCRBV3S1A0A5B6 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.65□□□□□ -0.06
TCRBV3S1A0A5B6 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TCRBV3S1A0A5B6 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TCRBV3S1A0A5B6 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
TCRBV3S1A0A5B6 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.65□□□□□ -0.06
TCRBV3S1A0A5B6 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
TCRBV3S1A0A5B6 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TCRBV3S1A0A5B6 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TCRBV3S1A0A5B6 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms