Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV18A0A075B6X5 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TRAV18A0A075B6X5 AC140479.7-201ENST00000636301 2332 ntBASIC13.55□□□□□ -0.24
TRAV18A0A075B6X5 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV18A0A075B6X5 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV18A0A075B6X5 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV18A0A075B6X5 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.54□□□□□ -0.24
TRAV18A0A075B6X5 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV18A0A075B6X5 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.54□□□□□ -0.24
TRAV18A0A075B6X5 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV18A0A075B6X5 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV18A0A075B6X5 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV18A0A075B6X5 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV18A0A075B6X5 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV18A0A075B6X5 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC13.54□□□□□ -0.24
TRAV18A0A075B6X5 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV18A0A075B6X5 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.54□□□□□ -0.24
TRAV18A0A075B6X5 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV18A0A075B6X5 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV18A0A075B6X5 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.54□□□□□ -0.24
TRAV18A0A075B6X5 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.54□□□□□ -0.24
TRAV18A0A075B6X5 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV18A0A075B6X5 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV18A0A075B6X5 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV18A0A075B6X5 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV18A0A075B6X5 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV18A0A075B6X5 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.54□□□□□ -0.24
TRAV18A0A075B6X5 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV18A0A075B6X5 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC13.54□□□□□ -0.24
TRAV18A0A075B6X5 TSPY19P-201ENST00000418461 509 ntBASIC13.54□□□□□ -0.24
TRAV18A0A075B6X5 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV18A0A075B6X5 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC13.54□□□□□ -0.24
TRAV18A0A075B6X5 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV18A0A075B6X5 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV18A0A075B6X5 TSPY18P-201ENST00000441642 509 ntBASIC13.54□□□□□ -0.24
TRAV18A0A075B6X5 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV18A0A075B6X5 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV18A0A075B6X5 RPS29-206ENST00000557111 488 ntTSL 2 BASIC13.54□□□□□ -0.24
TRAV18A0A075B6X5 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC13.54□□□□□ -0.24
TRAV18A0A075B6X5 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC13.54□□□□□ -0.24
TRAV18A0A075B6X5 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV18A0A075B6X5 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV18A0A075B6X5 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV18A0A075B6X5 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV18A0A075B6X5 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV18A0A075B6X5 AL691432.1-201ENST00000596308 1422 ntBASIC13.54□□□□□ -0.24
TRAV18A0A075B6X5 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV18A0A075B6X5 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV18A0A075B6X5 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.54□□□□□ -0.24
TRAV18A0A075B6X5 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV18A0A075B6X5 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
TRAV18A0A075B6X5 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
TRAV18A0A075B6X5 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV18A0A075B6X5 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV18A0A075B6X5 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV18A0A075B6X5 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
TRAV18A0A075B6X5 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV18A0A075B6X5 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV18A0A075B6X5 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV18A0A075B6X5 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV18A0A075B6X5 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
TRAV18A0A075B6X5 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
TRAV18A0A075B6X5 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV18A0A075B6X5 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC13.53□□□□□ -0.24
TRAV18A0A075B6X5 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
TRAV18A0A075B6X5 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV18A0A075B6X5 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC13.53□□□□□ -0.24
TRAV18A0A075B6X5 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.53□□□□□ -0.24
TRAV18A0A075B6X5 AC005840.4-201ENST00000541242 2494 ntBASIC13.53□□□□□ -0.24
TRAV18A0A075B6X5 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV18A0A075B6X5 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV18A0A075B6X5 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
TRAV18A0A075B6X5 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV18A0A075B6X5 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV18A0A075B6X5 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC13.53□□□□□ -0.24
TRAV18A0A075B6X5 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV18A0A075B6X5 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.53□□□□□ -0.24
TRAV18A0A075B6X5 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV18A0A075B6X5 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV18A0A075B6X5 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV18A0A075B6X5 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV18A0A075B6X5 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV18A0A075B6X5 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV18A0A075B6X5 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV18A0A075B6X5 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC13.53□□□□□ -0.24
TRAV18A0A075B6X5 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC13.53□□□□□ -0.24
TRAV18A0A075B6X5 AC092474.2-201ENST00000424288 719 ntBASIC13.53□□□□□ -0.24
TRAV18A0A075B6X5 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC13.53□□□□□ -0.24
TRAV18A0A075B6X5 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC13.53□□□□□ -0.24
TRAV18A0A075B6X5 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC13.53□□□□□ -0.24
TRAV18A0A075B6X5 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC13.53□□□□□ -0.24
TRAV18A0A075B6X5 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC13.53□□□□□ -0.24
TRAV18A0A075B6X5 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC13.53□□□□□ -0.24
TRAV18A0A075B6X5 LINC01711-201ENST00000598340 967 ntBASIC13.53□□□□□ -0.24
TRAV18A0A075B6X5 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.53□□□□□ -0.24
TRAV18A0A075B6X5 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV18A0A075B6X5 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV18A0A075B6X5 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV18A0A075B6X5 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.53□□□□□ -0.24
TRAV18A0A075B6X5 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms