Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHGB1Q9Y5G3 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC14.44□□□□□ -0.1
PCDHGB1Q9Y5G3 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCDHGB1Q9Y5G3 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC14.44□□□□□ -0.1
PCDHGB1Q9Y5G3 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHGB1Q9Y5G3 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHGB1Q9Y5G3 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
PCDHGB1Q9Y5G3 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.43□□□□□ -0.1
PCDHGB1Q9Y5G3 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.43□□□□□ -0.1
PCDHGB1Q9Y5G3 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHGB1Q9Y5G3 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHGB1Q9Y5G3 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
PCDHGB1Q9Y5G3 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.43□□□□□ -0.1
PCDHGB1Q9Y5G3 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHGB1Q9Y5G3 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC14.43□□□□□ -0.1
PCDHGB1Q9Y5G3 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC14.43□□□□□ -0.1
PCDHGB1Q9Y5G3 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHGB1Q9Y5G3 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHGB1Q9Y5G3 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHGB1Q9Y5G3 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHGB1Q9Y5G3 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHGB1Q9Y5G3 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHGB1Q9Y5G3 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
PCDHGB1Q9Y5G3 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHGB1Q9Y5G3 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHGB1Q9Y5G3 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHGB1Q9Y5G3 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.43□□□□□ -0.1
PCDHGB1Q9Y5G3 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHGB1Q9Y5G3 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHGB1Q9Y5G3 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC14.43□□□□□ -0.1
PCDHGB1Q9Y5G3 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHGB1Q9Y5G3 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHGB1Q9Y5G3 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.43□□□□□ -0.1
PCDHGB1Q9Y5G3 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC14.43□□□□□ -0.1
PCDHGB1Q9Y5G3 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHGB1Q9Y5G3 FAM185BP-201ENST00000443595 716 ntBASIC14.43□□□□□ -0.1
PCDHGB1Q9Y5G3 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC14.43□□□□□ -0.1
PCDHGB1Q9Y5G3 CIPC-205ENST00000555437 566 ntTSL 3 BASIC14.43□□□□□ -0.1
PCDHGB1Q9Y5G3 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
PCDHGB1Q9Y5G3 AL031432.2-201ENST00000566714 459 ntBASIC14.43□□□□□ -0.1
PCDHGB1Q9Y5G3 AL928711.1-201ENST00000570165 459 ntBASIC14.43□□□□□ -0.1
PCDHGB1Q9Y5G3 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.43□□□□□ -0.1
PCDHGB1Q9Y5G3 CYGB-205ENST00000590175 830 ntTSL 3 BASIC14.43□□□□□ -0.1
PCDHGB1Q9Y5G3 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.43□□□□□ -0.1
PCDHGB1Q9Y5G3 AL691403.2-201ENST00000618460 490 ntBASIC14.43□□□□□ -0.1
PCDHGB1Q9Y5G3 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.43□□□□□ -0.1
PCDHGB1Q9Y5G3 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC14.43□□□□□ -0.1
PCDHGB1Q9Y5G3 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
PCDHGB1Q9Y5G3 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHGB1Q9Y5G3 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHGB1Q9Y5G3 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHGB1Q9Y5G3 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHGB1Q9Y5G3 ZNF259P1-201ENST00000407656 1365 ntBASIC14.43□□□□□ -0.1
PCDHGB1Q9Y5G3 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHGB1Q9Y5G3 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHGB1Q9Y5G3 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.43□□□□□ -0.1
PCDHGB1Q9Y5G3 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.43□□□□□ -0.1
PCDHGB1Q9Y5G3 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
PCDHGB1Q9Y5G3 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHGB1Q9Y5G3 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCDHGB1Q9Y5G3 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHGB1Q9Y5G3 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.42□□□□□ -0.1
PCDHGB1Q9Y5G3 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.42□□□□□ -0.1
PCDHGB1Q9Y5G3 AC027601.5-201ENST00000624065 2482 ntBASIC14.42□□□□□ -0.1
PCDHGB1Q9Y5G3 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHGB1Q9Y5G3 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.42□□□□□ -0.1
PCDHGB1Q9Y5G3 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.42□□□□□ -0.1
PCDHGB1Q9Y5G3 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
PCDHGB1Q9Y5G3 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHGB1Q9Y5G3 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHGB1Q9Y5G3 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHGB1Q9Y5G3 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.42□□□□□ -0.1
PCDHGB1Q9Y5G3 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHGB1Q9Y5G3 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHGB1Q9Y5G3 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.42□□□□□ -0.1
PCDHGB1Q9Y5G3 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHGB1Q9Y5G3 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHGB1Q9Y5G3 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHGB1Q9Y5G3 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.42□□□□□ -0.1
PCDHGB1Q9Y5G3 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHGB1Q9Y5G3 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHGB1Q9Y5G3 FIS1-203ENST00000442303 631 ntTSL 3 BASIC14.42□□□□□ -0.1
PCDHGB1Q9Y5G3 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
PCDHGB1Q9Y5G3 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC14.42□□□□□ -0.1
PCDHGB1Q9Y5G3 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC14.42□□□□□ -0.1
PCDHGB1Q9Y5G3 OR7E14P-202ENST00000530490 1290 ntBASIC14.42□□□□□ -0.1
PCDHGB1Q9Y5G3 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
PCDHGB1Q9Y5G3 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC14.42□□□□□ -0.1
PCDHGB1Q9Y5G3 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.42□□□□□ -0.1
PCDHGB1Q9Y5G3 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC14.42□□□□□ -0.1
PCDHGB1Q9Y5G3 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHGB1Q9Y5G3 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
PCDHGB1Q9Y5G3 AC127383.1-201ENST00000444697 1800 ntBASIC14.42□□□□□ -0.1
PCDHGB1Q9Y5G3 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC14.42□□□□□ -0.1
PCDHGB1Q9Y5G3 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHGB1Q9Y5G3 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHGB1Q9Y5G3 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHGB1Q9Y5G3 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
PCDHGB1Q9Y5G3 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PCDHGB1Q9Y5G3 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms