Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
R3HCC1Q9Y3T6 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
R3HCC1Q9Y3T6 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
R3HCC1Q9Y3T6 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
R3HCC1Q9Y3T6 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC18.08■□□□□ 0.48
R3HCC1Q9Y3T6 LINC00895-201ENST00000629028 1637 ntBASIC18.08■□□□□ 0.48
R3HCC1Q9Y3T6 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
R3HCC1Q9Y3T6 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
R3HCC1Q9Y3T6 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
R3HCC1Q9Y3T6 ARHGAP23P1-201ENST00000562773 1937 ntBASIC18.08■□□□□ 0.48
R3HCC1Q9Y3T6 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.07■□□□□ 0.48
R3HCC1Q9Y3T6 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
R3HCC1Q9Y3T6 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
R3HCC1Q9Y3T6 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
R3HCC1Q9Y3T6 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC18.07■□□□□ 0.48
R3HCC1Q9Y3T6 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
R3HCC1Q9Y3T6 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
R3HCC1Q9Y3T6 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
R3HCC1Q9Y3T6 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC18.07■□□□□ 0.48
R3HCC1Q9Y3T6 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
R3HCC1Q9Y3T6 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
R3HCC1Q9Y3T6 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
R3HCC1Q9Y3T6 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
R3HCC1Q9Y3T6 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
R3HCC1Q9Y3T6 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
R3HCC1Q9Y3T6 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
R3HCC1Q9Y3T6 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
R3HCC1Q9Y3T6 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC18.07■□□□□ 0.48
R3HCC1Q9Y3T6 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC18.07■□□□□ 0.48
R3HCC1Q9Y3T6 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.07■□□□□ 0.48
R3HCC1Q9Y3T6 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.07■□□□□ 0.48
R3HCC1Q9Y3T6 AC005829.1-201ENST00000570002 483 ntBASIC18.07■□□□□ 0.48
R3HCC1Q9Y3T6 AC010327.4-202ENST00000591484 748 ntBASIC18.07■□□□□ 0.48
R3HCC1Q9Y3T6 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.07■□□□□ 0.48
R3HCC1Q9Y3T6 C20orf181-201ENST00000623918 480 ntBASIC18.07■□□□□ 0.48
R3HCC1Q9Y3T6 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.07■□□□□ 0.48
R3HCC1Q9Y3T6 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
R3HCC1Q9Y3T6 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC18.07■□□□□ 0.48
R3HCC1Q9Y3T6 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
R3HCC1Q9Y3T6 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
R3HCC1Q9Y3T6 OS9-207ENST00000439210 1946 ntTSL 2 BASIC18.07■□□□□ 0.48
R3HCC1Q9Y3T6 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
R3HCC1Q9Y3T6 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
R3HCC1Q9Y3T6 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
R3HCC1Q9Y3T6 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
R3HCC1Q9Y3T6 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC18.07■□□□□ 0.48
R3HCC1Q9Y3T6 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
R3HCC1Q9Y3T6 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
R3HCC1Q9Y3T6 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
R3HCC1Q9Y3T6 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
R3HCC1Q9Y3T6 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.06■□□□□ 0.48
R3HCC1Q9Y3T6 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
R3HCC1Q9Y3T6 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
R3HCC1Q9Y3T6 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
R3HCC1Q9Y3T6 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
R3HCC1Q9Y3T6 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
R3HCC1Q9Y3T6 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
R3HCC1Q9Y3T6 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
R3HCC1Q9Y3T6 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
R3HCC1Q9Y3T6 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
R3HCC1Q9Y3T6 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
R3HCC1Q9Y3T6 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
R3HCC1Q9Y3T6 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
R3HCC1Q9Y3T6 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
R3HCC1Q9Y3T6 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.06■□□□□ 0.48
R3HCC1Q9Y3T6 PMS2P4-201ENST00000412466 1052 ntBASIC18.06■□□□□ 0.48
R3HCC1Q9Y3T6 UPF3AP3-201ENST00000420996 769 ntBASIC18.06■□□□□ 0.48
R3HCC1Q9Y3T6 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
R3HCC1Q9Y3T6 FAM58CP-201ENST00000435741 640 ntBASIC18.06■□□□□ 0.48
R3HCC1Q9Y3T6 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
R3HCC1Q9Y3T6 AC140658.5-201ENST00000438532 169 ntBASIC18.06■□□□□ 0.48
R3HCC1Q9Y3T6 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
R3HCC1Q9Y3T6 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
R3HCC1Q9Y3T6 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC18.06■□□□□ 0.48
R3HCC1Q9Y3T6 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
R3HCC1Q9Y3T6 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
R3HCC1Q9Y3T6 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.06■□□□□ 0.48
R3HCC1Q9Y3T6 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC18.06■□□□□ 0.48
R3HCC1Q9Y3T6 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
R3HCC1Q9Y3T6 MIR4492-201ENST00000581627 80 ntBASIC18.06■□□□□ 0.48
R3HCC1Q9Y3T6 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
R3HCC1Q9Y3T6 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.06■□□□□ 0.48
R3HCC1Q9Y3T6 AL031055.1-201ENST00000606362 631 ntBASIC18.06■□□□□ 0.48
R3HCC1Q9Y3T6 AC023511.2-201ENST00000618803 211 ntBASIC18.06■□□□□ 0.48
R3HCC1Q9Y3T6 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
R3HCC1Q9Y3T6 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
R3HCC1Q9Y3T6 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
R3HCC1Q9Y3T6 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
R3HCC1Q9Y3T6 MARS-233ENST00000628866 2583 ntTSL 5 BASIC18.06■□□□□ 0.48
R3HCC1Q9Y3T6 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
R3HCC1Q9Y3T6 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC18.06■□□□□ 0.48
R3HCC1Q9Y3T6 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC18.06■□□□□ 0.48
R3HCC1Q9Y3T6 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
R3HCC1Q9Y3T6 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
R3HCC1Q9Y3T6 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
R3HCC1Q9Y3T6 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
R3HCC1Q9Y3T6 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
R3HCC1Q9Y3T6 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
R3HCC1Q9Y3T6 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
R3HCC1Q9Y3T6 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms