Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.4□□□□□ -0.1
LRFN1Q9P244 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.4□□□□□ -0.1
LRFN1Q9P244 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
LRFN1Q9P244 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRFN1Q9P244 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRFN1Q9P244 AL596257.1-201ENST00000641463 2694 ntBASIC14.4□□□□□ -0.1
LRFN1Q9P244 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.4□□□□□ -0.1
LRFN1Q9P244 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRFN1Q9P244 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRFN1Q9P244 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRFN1Q9P244 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRFN1Q9P244 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.4□□□□□ -0.1
LRFN1Q9P244 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.4□□□□□ -0.1
LRFN1Q9P244 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRFN1Q9P244 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
LRFN1Q9P244 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
LRFN1Q9P244 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
LRFN1Q9P244 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.4□□□□□ -0.1
LRFN1Q9P244 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
LRFN1Q9P244 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LRFN1Q9P244 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRFN1Q9P244 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRFN1Q9P244 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LRFN1Q9P244 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRFN1Q9P244 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
LRFN1Q9P244 INTS4P2-202ENST00000614726 2019 ntBASIC14.39□□□□□ -0.11
LRFN1Q9P244 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRFN1Q9P244 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRFN1Q9P244 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRFN1Q9P244 AC006449.5-201ENST00000610658 2098 ntBASIC14.39□□□□□ -0.11
LRFN1Q9P244 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRFN1Q9P244 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
LRFN1Q9P244 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
LRFN1Q9P244 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
LRFN1Q9P244 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.39□□□□□ -0.11
LRFN1Q9P244 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.39□□□□□ -0.11
LRFN1Q9P244 SOCS2P1-201ENST00000417727 557 ntBASIC14.39□□□□□ -0.11
LRFN1Q9P244 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.39□□□□□ -0.11
LRFN1Q9P244 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC14.39□□□□□ -0.11
LRFN1Q9P244 ACA64.2-201ENST00000459014 129 ntBASIC14.39□□□□□ -0.11
LRFN1Q9P244 AL049840.4-201ENST00000602422 811 ntBASIC14.39□□□□□ -0.11
LRFN1Q9P244 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.39□□□□□ -0.11
LRFN1Q9P244 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LRFN1Q9P244 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.39□□□□□ -0.11
LRFN1Q9P244 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRFN1Q9P244 ABBA01031660.1-201ENST00000635219 756 ntBASIC14.39□□□□□ -0.11
LRFN1Q9P244 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.39□□□□□ -0.11
LRFN1Q9P244 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.39□□□□□ -0.11
LRFN1Q9P244 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRFN1Q9P244 AL121723.1-201ENST00000445194 1519 ntBASIC14.39□□□□□ -0.11
LRFN1Q9P244 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
LRFN1Q9P244 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRFN1Q9P244 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRFN1Q9P244 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRFN1Q9P244 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
LRFN1Q9P244 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRFN1Q9P244 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
LRFN1Q9P244 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LRFN1Q9P244 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
LRFN1Q9P244 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
LRFN1Q9P244 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.38□□□□□ -0.11
LRFN1Q9P244 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
LRFN1Q9P244 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
LRFN1Q9P244 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRFN1Q9P244 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRFN1Q9P244 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRFN1Q9P244 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
LRFN1Q9P244 AC069224.1-201ENST00000566372 1715 ntBASIC14.38□□□□□ -0.11
LRFN1Q9P244 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.38□□□□□ -0.11
LRFN1Q9P244 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LRFN1Q9P244 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRFN1Q9P244 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
LRFN1Q9P244 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC14.38□□□□□ -0.11
LRFN1Q9P244 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
LRFN1Q9P244 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.38□□□□□ -0.11
LRFN1Q9P244 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.38□□□□□ -0.11
LRFN1Q9P244 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
LRFN1Q9P244 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LRFN1Q9P244 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.38□□□□□ -0.11
LRFN1Q9P244 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.38□□□□□ -0.11
LRFN1Q9P244 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
LRFN1Q9P244 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRFN1Q9P244 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRFN1Q9P244 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRFN1Q9P244 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LRFN1Q9P244 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.38□□□□□ -0.11
LRFN1Q9P244 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
LRFN1Q9P244 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.38□□□□□ -0.11
LRFN1Q9P244 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRFN1Q9P244 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.38□□□□□ -0.11
LRFN1Q9P244 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.38□□□□□ -0.11
LRFN1Q9P244 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.38□□□□□ -0.11
LRFN1Q9P244 AC008735.3-201ENST00000596646 500 ntBASIC14.38□□□□□ -0.11
LRFN1Q9P244 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRFN1Q9P244 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.38□□□□□ -0.11
LRFN1Q9P244 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC14.38□□□□□ -0.11
LRFN1Q9P244 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14.38□□□□□ -0.11
LRFN1Q9P244 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.38□□□□□ -0.11
LRFN1Q9P244 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
LRFN1Q9P244 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms