Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COL20A1Q9P218 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC17.55■□□□□ 0.4
COL20A1Q9P218 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC17.55■□□□□ 0.4
COL20A1Q9P218 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
COL20A1Q9P218 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
COL20A1Q9P218 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COL20A1Q9P218 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COL20A1Q9P218 FAM197Y7-201ENST00000432892 766 ntBASIC17.55■□□□□ 0.4
COL20A1Q9P218 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.55■□□□□ 0.4
COL20A1Q9P218 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC17.55■□□□□ 0.4
COL20A1Q9P218 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COL20A1Q9P218 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC17.55■□□□□ 0.4
COL20A1Q9P218 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COL20A1Q9P218 TECR-220ENST00000600083 1204 ntTSL 2 BASIC17.55■□□□□ 0.4
COL20A1Q9P218 PRSS30P-206ENST00000641773 873 ntBASIC17.55■□□□□ 0.4
COL20A1Q9P218 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL20A1Q9P218 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
COL20A1Q9P218 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
COL20A1Q9P218 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.55■□□□□ 0.4
COL20A1Q9P218 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
COL20A1Q9P218 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL20A1Q9P218 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL20A1Q9P218 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
COL20A1Q9P218 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
COL20A1Q9P218 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC17.55■□□□□ 0.4
COL20A1Q9P218 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
COL20A1Q9P218 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL20A1Q9P218 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
COL20A1Q9P218 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL20A1Q9P218 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL20A1Q9P218 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COL20A1Q9P218 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COL20A1Q9P218 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC17.54■□□□□ 0.4
COL20A1Q9P218 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.54■□□□□ 0.4
COL20A1Q9P218 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC17.54■□□□□ 0.4
COL20A1Q9P218 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL20A1Q9P218 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC17.54■□□□□ 0.4
COL20A1Q9P218 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
COL20A1Q9P218 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL20A1Q9P218 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COL20A1Q9P218 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC17.54■□□□□ 0.4
COL20A1Q9P218 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC17.54■□□□□ 0.4
COL20A1Q9P218 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
COL20A1Q9P218 AL590640.2-201ENST00000457038 527 ntBASIC17.54■□□□□ 0.4
COL20A1Q9P218 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC17.54■□□□□ 0.4
COL20A1Q9P218 AC092658.1-201ENST00000505836 891 ntBASIC17.54■□□□□ 0.4
COL20A1Q9P218 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC17.54■□□□□ 0.4
COL20A1Q9P218 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC17.54■□□□□ 0.4
COL20A1Q9P218 AC078819.1-201ENST00000547454 765 ntBASIC17.54■□□□□ 0.4
COL20A1Q9P218 AC012085.1-201ENST00000548270 765 ntBASIC17.54■□□□□ 0.4
COL20A1Q9P218 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC17.54■□□□□ 0.4
COL20A1Q9P218 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL20A1Q9P218 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
COL20A1Q9P218 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.54■□□□□ 0.4
COL20A1Q9P218 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL20A1Q9P218 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
COL20A1Q9P218 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
COL20A1Q9P218 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL20A1Q9P218 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.54■□□□□ 0.4
COL20A1Q9P218 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL20A1Q9P218 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
COL20A1Q9P218 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
COL20A1Q9P218 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
COL20A1Q9P218 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
COL20A1Q9P218 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL20A1Q9P218 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL20A1Q9P218 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC17.53■□□□□ 0.4
COL20A1Q9P218 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL20A1Q9P218 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC17.53■□□□□ 0.4
COL20A1Q9P218 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL20A1Q9P218 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL20A1Q9P218 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL20A1Q9P218 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.53■□□□□ 0.4
COL20A1Q9P218 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL20A1Q9P218 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COL20A1Q9P218 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COL20A1Q9P218 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC17.53■□□□□ 0.4
COL20A1Q9P218 FAM86MP-201ENST00000340703 885 ntBASIC17.53■□□□□ 0.4
COL20A1Q9P218 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COL20A1Q9P218 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COL20A1Q9P218 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL20A1Q9P218 ACTBP8-201ENST00000403258 1108 ntBASIC17.53■□□□□ 0.4
COL20A1Q9P218 MIR1908-201ENST00000410394 80 ntBASIC17.53■□□□□ 0.4
COL20A1Q9P218 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC17.53■□□□□ 0.4
COL20A1Q9P218 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC17.53■□□□□ 0.4
COL20A1Q9P218 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
COL20A1Q9P218 KRT18P25-201ENST00000508931 1278 ntBASIC17.53■□□□□ 0.4
COL20A1Q9P218 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC17.53■□□□□ 0.4
COL20A1Q9P218 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.53■□□□□ 0.4
COL20A1Q9P218 RHOXF1P1-202ENST00000635473 501 ntBASIC17.53■□□□□ 0.4
COL20A1Q9P218 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
COL20A1Q9P218 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC17.53■□□□□ 0.4
COL20A1Q9P218 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL20A1Q9P218 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
COL20A1Q9P218 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
COL20A1Q9P218 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
COL20A1Q9P218 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COL20A1Q9P218 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COL20A1Q9P218 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
COL20A1Q9P218 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms