Protein–RNA interactions for Protein: Q9P1Z2

CALCOCO1, Calcium-binding and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1Q9P1Z2 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC17.25■□□□□ 0.35
CALCOCO1Q9P1Z2 AC011467.4-201ENST00000594891 528 ntBASIC17.25■□□□□ 0.35
CALCOCO1Q9P1Z2 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.25■□□□□ 0.35
CALCOCO1Q9P1Z2 AC022145.2-201ENST00000598203 171 ntBASIC17.25■□□□□ 0.35
CALCOCO1Q9P1Z2 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CALCOCO1Q9P1Z2 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC17.25■□□□□ 0.35
CALCOCO1Q9P1Z2 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CALCOCO1Q9P1Z2 AC126335.2-201ENST00000623362 4637 ntBASIC17.25■□□□□ 0.35
CALCOCO1Q9P1Z2 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.25■□□□□ 0.35
CALCOCO1Q9P1Z2 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CALCOCO1Q9P1Z2 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CALCOCO1Q9P1Z2 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC17.25■□□□□ 0.35
CALCOCO1Q9P1Z2 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CALCOCO1Q9P1Z2 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.25■□□□□ 0.35
CALCOCO1Q9P1Z2 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CALCOCO1Q9P1Z2 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC17.25■□□□□ 0.35
CALCOCO1Q9P1Z2 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC17.24■□□□□ 0.35
CALCOCO1Q9P1Z2 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CALCOCO1Q9P1Z2 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CALCOCO1Q9P1Z2 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CALCOCO1Q9P1Z2 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CALCOCO1Q9P1Z2 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CALCOCO1Q9P1Z2 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CALCOCO1Q9P1Z2 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CALCOCO1Q9P1Z2 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CALCOCO1Q9P1Z2 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC17.24■□□□□ 0.35
CALCOCO1Q9P1Z2 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CALCOCO1Q9P1Z2 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CALCOCO1Q9P1Z2 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.24■□□□□ 0.35
CALCOCO1Q9P1Z2 AC092364.2-202ENST00000597012 1073 ntBASIC17.24■□□□□ 0.35
CALCOCO1Q9P1Z2 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC17.24■□□□□ 0.35
CALCOCO1Q9P1Z2 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.24■□□□□ 0.35
CALCOCO1Q9P1Z2 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CALCOCO1Q9P1Z2 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
CALCOCO1Q9P1Z2 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CALCOCO1Q9P1Z2 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CALCOCO1Q9P1Z2 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CALCOCO1Q9P1Z2 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC17.24■□□□□ 0.35
CALCOCO1Q9P1Z2 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CALCOCO1Q9P1Z2 PCGF3-213ENST00000620529 1899 ntBASIC17.24■□□□□ 0.35
CALCOCO1Q9P1Z2 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CALCOCO1Q9P1Z2 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CALCOCO1Q9P1Z2 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CALCOCO1Q9P1Z2 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.24■□□□□ 0.35
CALCOCO1Q9P1Z2 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CALCOCO1Q9P1Z2 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CALCOCO1Q9P1Z2 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CALCOCO1Q9P1Z2 PRAL-201ENST00000624952 3286 ntBASIC17.23■□□□□ 0.35
CALCOCO1Q9P1Z2 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CALCOCO1Q9P1Z2 SUPT20HL2-201ENST00000486479 2409 ntBASIC17.23■□□□□ 0.35
CALCOCO1Q9P1Z2 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC17.23■□□□□ 0.35
CALCOCO1Q9P1Z2 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC17.23■□□□□ 0.35
CALCOCO1Q9P1Z2 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CALCOCO1Q9P1Z2 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CALCOCO1Q9P1Z2 CR383656.2-201ENST00000548656 2254 ntBASIC17.23■□□□□ 0.35
CALCOCO1Q9P1Z2 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CALCOCO1Q9P1Z2 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CALCOCO1Q9P1Z2 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC17.23■□□□□ 0.35
CALCOCO1Q9P1Z2 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CALCOCO1Q9P1Z2 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CALCOCO1Q9P1Z2 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC17.23■□□□□ 0.35
CALCOCO1Q9P1Z2 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.23■□□□□ 0.35
CALCOCO1Q9P1Z2 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CALCOCO1Q9P1Z2 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.23■□□□□ 0.35
CALCOCO1Q9P1Z2 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CALCOCO1Q9P1Z2 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CALCOCO1Q9P1Z2 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.23■□□□□ 0.35
CALCOCO1Q9P1Z2 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CALCOCO1Q9P1Z2 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CALCOCO1Q9P1Z2 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CALCOCO1Q9P1Z2 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC17.23■□□□□ 0.35
CALCOCO1Q9P1Z2 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.23■□□□□ 0.35
CALCOCO1Q9P1Z2 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC17.23■□□□□ 0.35
CALCOCO1Q9P1Z2 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.23■□□□□ 0.35
CALCOCO1Q9P1Z2 KRT8P48-201ENST00000515599 1220 ntBASIC17.23■□□□□ 0.35
CALCOCO1Q9P1Z2 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.23■□□□□ 0.35
CALCOCO1Q9P1Z2 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.23■□□□□ 0.35
CALCOCO1Q9P1Z2 AL138918.1-201ENST00000568306 659 ntBASIC17.23■□□□□ 0.35
CALCOCO1Q9P1Z2 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.23■□□□□ 0.35
CALCOCO1Q9P1Z2 RPS15-212ENST00000593052 629 ntTSL 2 BASIC17.23■□□□□ 0.35
CALCOCO1Q9P1Z2 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CALCOCO1Q9P1Z2 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.23■□□□□ 0.35
CALCOCO1Q9P1Z2 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CALCOCO1Q9P1Z2 AC007326.2-201ENST00000624224 7579 ntBASIC17.23■□□□□ 0.35
CALCOCO1Q9P1Z2 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CALCOCO1Q9P1Z2 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CALCOCO1Q9P1Z2 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CALCOCO1Q9P1Z2 PCDHA3-202ENST00000532566 4594 ntBASIC17.23■□□□□ 0.35
CALCOCO1Q9P1Z2 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CALCOCO1Q9P1Z2 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CALCOCO1Q9P1Z2 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
CALCOCO1Q9P1Z2 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC17.23■□□□□ 0.35
CALCOCO1Q9P1Z2 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.23■□□□□ 0.35
CALCOCO1Q9P1Z2 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC17.23■□□□□ 0.35
CALCOCO1Q9P1Z2 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CALCOCO1Q9P1Z2 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.23■□□□□ 0.35
CALCOCO1Q9P1Z2 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CALCOCO1Q9P1Z2 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CALCOCO1Q9P1Z2 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CALCOCO1Q9P1Z2 WASH6P-202ENST00000359512 1437 ntBASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms