Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ECHDC1Q9NTX5 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
ECHDC1Q9NTX5 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ECHDC1Q9NTX5 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC19.03■□□□□ 0.64
ECHDC1Q9NTX5 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ECHDC1Q9NTX5 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ECHDC1Q9NTX5 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
ECHDC1Q9NTX5 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
ECHDC1Q9NTX5 CASK-202ENST00000378158 3848 ntTSL 5 BASIC19.03■□□□□ 0.64
ECHDC1Q9NTX5 GOLGA6L11P-201ENST00000417252 1298 ntBASIC19.03■□□□□ 0.64
ECHDC1Q9NTX5 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC19.03■□□□□ 0.64
ECHDC1Q9NTX5 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ECHDC1Q9NTX5 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC19.03■□□□□ 0.64
ECHDC1Q9NTX5 AC036164.1-201ENST00000570544 333 ntBASIC19.03■□□□□ 0.64
ECHDC1Q9NTX5 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ECHDC1Q9NTX5 AL132655.2-201ENST00000596276 594 ntBASIC19.03■□□□□ 0.64
ECHDC1Q9NTX5 YTHDF3-AS1-201ENST00000603538 718 ntBASIC19.03■□□□□ 0.64
ECHDC1Q9NTX5 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC19.03■□□□□ 0.64
ECHDC1Q9NTX5 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
ECHDC1Q9NTX5 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC19.03■□□□□ 0.64
ECHDC1Q9NTX5 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ECHDC1Q9NTX5 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC19.03■□□□□ 0.64
ECHDC1Q9NTX5 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ECHDC1Q9NTX5 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ECHDC1Q9NTX5 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC19.03■□□□□ 0.64
ECHDC1Q9NTX5 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
ECHDC1Q9NTX5 KRT8P44-201ENST00000441609 1350 ntBASIC19.03■□□□□ 0.64
ECHDC1Q9NTX5 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC19.03■□□□□ 0.64
ECHDC1Q9NTX5 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ECHDC1Q9NTX5 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ECHDC1Q9NTX5 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ECHDC1Q9NTX5 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
ECHDC1Q9NTX5 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
ECHDC1Q9NTX5 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ECHDC1Q9NTX5 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
ECHDC1Q9NTX5 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
ECHDC1Q9NTX5 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC19.02■□□□□ 0.64
ECHDC1Q9NTX5 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
ECHDC1Q9NTX5 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC19.02■□□□□ 0.64
ECHDC1Q9NTX5 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
ECHDC1Q9NTX5 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
ECHDC1Q9NTX5 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
ECHDC1Q9NTX5 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC19.02■□□□□ 0.64
ECHDC1Q9NTX5 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC19.02■□□□□ 0.64
ECHDC1Q9NTX5 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ECHDC1Q9NTX5 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ECHDC1Q9NTX5 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ECHDC1Q9NTX5 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ECHDC1Q9NTX5 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC19.02■□□□□ 0.64
ECHDC1Q9NTX5 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC19.02■□□□□ 0.64
ECHDC1Q9NTX5 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ECHDC1Q9NTX5 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC19.02■□□□□ 0.64
ECHDC1Q9NTX5 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
ECHDC1Q9NTX5 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ECHDC1Q9NTX5 CALY-202ENST00000368555 783 ntTSL 2 BASIC19.02■□□□□ 0.64
ECHDC1Q9NTX5 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC19.02■□□□□ 0.64
ECHDC1Q9NTX5 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
ECHDC1Q9NTX5 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
ECHDC1Q9NTX5 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
ECHDC1Q9NTX5 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
ECHDC1Q9NTX5 FAM86LP-201ENST00000478302 853 ntBASIC19.02■□□□□ 0.64
ECHDC1Q9NTX5 AC104640.1-201ENST00000562617 2109 ntBASIC19.02■□□□□ 0.64
ECHDC1Q9NTX5 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC19.02■□□□□ 0.64
ECHDC1Q9NTX5 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
ECHDC1Q9NTX5 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
ECHDC1Q9NTX5 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC19.02■□□□□ 0.63
ECHDC1Q9NTX5 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
ECHDC1Q9NTX5 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
ECHDC1Q9NTX5 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ECHDC1Q9NTX5 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ECHDC1Q9NTX5 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ECHDC1Q9NTX5 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ECHDC1Q9NTX5 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ECHDC1Q9NTX5 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
ECHDC1Q9NTX5 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
ECHDC1Q9NTX5 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC19.01■□□□□ 0.63
ECHDC1Q9NTX5 AC138035.3-201ENST00000622706 2791 ntBASIC19.01■□□□□ 0.63
ECHDC1Q9NTX5 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC19.01■□□□□ 0.63
ECHDC1Q9NTX5 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ECHDC1Q9NTX5 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
ECHDC1Q9NTX5 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
ECHDC1Q9NTX5 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ECHDC1Q9NTX5 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC19.01■□□□□ 0.63
ECHDC1Q9NTX5 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ECHDC1Q9NTX5 FADS2-205ENST00000517839 469 ntTSL 3 BASIC19.01■□□□□ 0.63
ECHDC1Q9NTX5 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC19.01■□□□□ 0.63
ECHDC1Q9NTX5 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ECHDC1Q9NTX5 AC092364.2-202ENST00000597012 1073 ntBASIC19.01■□□□□ 0.63
ECHDC1Q9NTX5 MIR8072-201ENST00000614241 80 ntBASIC19.01■□□□□ 0.63
ECHDC1Q9NTX5 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC19.01■□□□□ 0.63
ECHDC1Q9NTX5 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
ECHDC1Q9NTX5 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
ECHDC1Q9NTX5 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ECHDC1Q9NTX5 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
ECHDC1Q9NTX5 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
ECHDC1Q9NTX5 AL109954.1-202ENST00000564051 2148 ntBASIC19.01■□□□□ 0.63
ECHDC1Q9NTX5 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC19.01■□□□□ 0.63
ECHDC1Q9NTX5 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC19.01■□□□□ 0.63
ECHDC1Q9NTX5 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
ECHDC1Q9NTX5 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms