Protein–RNA interactions for Protein: Q99952

PTPN18, Tyrosine-protein phosphatase non-receptor type 18, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18Q99952 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN18Q99952 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN18Q99952 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
PTPN18Q99952 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
PTPN18Q99952 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
PTPN18Q99952 SNHG1-213ENST00000540725 1374 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PTPN18Q99952 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PTPN18Q99952 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN18Q99952 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.65■□□□□ 0.42
PTPN18Q99952 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
PTPN18Q99952 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
PTPN18Q99952 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN18Q99952 AL157791.1-201ENST00000553667 1699 ntBASIC17.65■□□□□ 0.42
PTPN18Q99952 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC17.65■□□□□ 0.42
PTPN18Q99952 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN18Q99952 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN18Q99952 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN18Q99952 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN18Q99952 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN18Q99952 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN18Q99952 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN18Q99952 PDIA3P2-201ENST00000428073 158 ntBASIC17.65■□□□□ 0.42
PTPN18Q99952 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC17.65■□□□□ 0.42
PTPN18Q99952 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN18Q99952 SYT17-208ENST00000568433 812 ntTSL 3 BASIC17.65■□□□□ 0.42
PTPN18Q99952 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN18Q99952 RN7SL736P-201ENST00000613111 269 ntBASIC17.65■□□□□ 0.42
PTPN18Q99952 AC138466.3-201ENST00000619983 221 ntBASIC17.65■□□□□ 0.42
PTPN18Q99952 AL162426.1-201ENST00000624141 743 ntBASIC17.65■□□□□ 0.42
PTPN18Q99952 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
PTPN18Q99952 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
PTPN18Q99952 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN18Q99952 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
PTPN18Q99952 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC17.65■□□□□ 0.42
PTPN18Q99952 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN18Q99952 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN18Q99952 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN18Q99952 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PTPN18Q99952 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PTPN18Q99952 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PTPN18Q99952 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
PTPN18Q99952 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN18Q99952 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN18Q99952 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN18Q99952 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.64■□□□□ 0.41
PTPN18Q99952 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
PTPN18Q99952 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN18Q99952 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN18Q99952 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN18Q99952 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN18Q99952 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PTPN18Q99952 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN18Q99952 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
PTPN18Q99952 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN18Q99952 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN18Q99952 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC17.64■□□□□ 0.41
PTPN18Q99952 AC006335.1-201ENST00000445200 547 ntBASIC17.64■□□□□ 0.41
PTPN18Q99952 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC17.64■□□□□ 0.41
PTPN18Q99952 AC125604.1-201ENST00000496255 707 ntBASIC17.64■□□□□ 0.41
PTPN18Q99952 AC022616.1-201ENST00000518688 554 ntBASIC17.64■□□□□ 0.41
PTPN18Q99952 CFL1-206ENST00000527344 962 ntTSL 2 BASIC17.64■□□□□ 0.41
PTPN18Q99952 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC17.64■□□□□ 0.41
PTPN18Q99952 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
PTPN18Q99952 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN18Q99952 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
PTPN18Q99952 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN18Q99952 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN18Q99952 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN18Q99952 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN18Q99952 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC17.64■□□□□ 0.41
PTPN18Q99952 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN18Q99952 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN18Q99952 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN18Q99952 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN18Q99952 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
PTPN18Q99952 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC17.63■□□□□ 0.41
PTPN18Q99952 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN18Q99952 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
PTPN18Q99952 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN18Q99952 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
PTPN18Q99952 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN18Q99952 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN18Q99952 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN18Q99952 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
PTPN18Q99952 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
PTPN18Q99952 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
PTPN18Q99952 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN18Q99952 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN18Q99952 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN18Q99952 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
PTPN18Q99952 AC026316.1-201ENST00000398900 414 ntBASIC17.63■□□□□ 0.41
PTPN18Q99952 RPL13AP19-201ENST00000434320 584 ntBASIC17.63■□□□□ 0.41
PTPN18Q99952 AC098935.1-201ENST00000446057 611 ntBASIC17.63■□□□□ 0.41
PTPN18Q99952 TUBB8P8-201ENST00000458717 1058 ntBASIC17.63■□□□□ 0.41
PTPN18Q99952 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PTPN18Q99952 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC17.63■□□□□ 0.41
PTPN18Q99952 AC019193.1-201ENST00000506678 823 ntBASIC17.63■□□□□ 0.41
PTPN18Q99952 AC116345.2-201ENST00000512837 523 ntBASIC17.63■□□□□ 0.41
PTPN18Q99952 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC17.63■□□□□ 0.41
PTPN18Q99952 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms