Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC4.59□□□□□ -1.67
HMCN1Q96RW7 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC4.59□□□□□ -1.67
HMCN1Q96RW7 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HMCN1Q96RW7 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
HMCN1Q96RW7 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HMCN1Q96RW7 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
HMCN1Q96RW7 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HMCN1Q96RW7 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
HMCN1Q96RW7 NF2-208ENST00000403435 2568 ntTSL 5 BASIC4.59□□□□□ -1.67
HMCN1Q96RW7 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC4.59□□□□□ -1.67
HMCN1Q96RW7 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC4.59□□□□□ -1.67
HMCN1Q96RW7 LXN-201ENST00000264265 1116 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HMCN1Q96RW7 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HMCN1Q96RW7 BANF1P3-201ENST00000412556 261 ntBASIC4.59□□□□□ -1.67
HMCN1Q96RW7 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
HMCN1Q96RW7 RN7SL81P-201ENST00000493781 261 ntBASIC4.59□□□□□ -1.67
HMCN1Q96RW7 AC139887.2-201ENST00000503571 531 ntTSL 4 BASIC4.59□□□□□ -1.67
HMCN1Q96RW7 AC004923.1-201ENST00000527543 776 ntTSL 5 BASIC4.59□□□□□ -1.67
HMCN1Q96RW7 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC4.59□□□□□ -1.67
HMCN1Q96RW7 AL136298.3-201ENST00000556746 445 ntBASIC4.59□□□□□ -1.67
HMCN1Q96RW7 AC100786.1-201ENST00000583018 513 ntTSL 3 BASIC4.59□□□□□ -1.67
HMCN1Q96RW7 LINC01451-201ENST00000623792 534 ntBASIC4.59□□□□□ -1.67
HMCN1Q96RW7 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
HMCN1Q96RW7 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC4.59□□□□□ -1.67
HMCN1Q96RW7 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC4.59□□□□□ -1.67
HMCN1Q96RW7 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HMCN1Q96RW7 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC4.59□□□□□ -1.67
HMCN1Q96RW7 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
HMCN1Q96RW7 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HMCN1Q96RW7 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
HMCN1Q96RW7 AL158070.2-201ENST00000623713 1621 ntBASIC4.59□□□□□ -1.67
HMCN1Q96RW7 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HMCN1Q96RW7 GRP-201ENST00000256857 848 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
HMCN1Q96RW7 AC089987.2-201ENST00000328207 936 ntBASIC4.59□□□□□ -1.67
HMCN1Q96RW7 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HMCN1Q96RW7 TAC3-205ENST00000415231 588 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
HMCN1Q96RW7 GUSBP10-201ENST00000417412 665 ntBASIC4.59□□□□□ -1.67
HMCN1Q96RW7 MRPL45P2-201ENST00000425159 927 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HMCN1Q96RW7 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC4.59□□□□□ -1.67
HMCN1Q96RW7 AC106869.1-201ENST00000448713 577 ntTSL 4 BASIC4.59□□□□□ -1.67
HMCN1Q96RW7 ALG10-202ENST00000538927 571 ntTSL 5 BASIC4.59□□□□□ -1.67
HMCN1Q96RW7 ZNF268-208ENST00000539248 759 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HMCN1Q96RW7 ZNF268-212ENST00000542711 861 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HMCN1Q96RW7 BOLA3P2-201ENST00000586496 323 ntBASIC4.59□□□□□ -1.67
HMCN1Q96RW7 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC4.59□□□□□ -1.67
HMCN1Q96RW7 AC079779.4-201ENST00000619113 548 ntTSL 5 BASIC4.59□□□□□ -1.67
HMCN1Q96RW7 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HMCN1Q96RW7 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HMCN1Q96RW7 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC4.59□□□□□ -1.67
HMCN1Q96RW7 HPRT1-201ENST00000298556 1407 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
HMCN1Q96RW7 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HMCN1Q96RW7 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
HMCN1Q96RW7 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HMCN1Q96RW7 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
HMCN1Q96RW7 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC4.59□□□□□ -1.67
HMCN1Q96RW7 API5-208ENST00000531273 1868 ntTSL 2 BASIC4.59□□□□□ -1.67
HMCN1Q96RW7 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
HMCN1Q96RW7 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
HMCN1Q96RW7 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
HMCN1Q96RW7 CST2-201ENST00000304725 748 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
HMCN1Q96RW7 MYL1-202ENST00000352451 1065 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
HMCN1Q96RW7 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
HMCN1Q96RW7 AL512599.1-201ENST00000430724 685 ntBASIC4.59□□□□□ -1.68
HMCN1Q96RW7 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC4.59□□□□□ -1.68
HMCN1Q96RW7 RN7SL487P-201ENST00000468140 344 ntBASIC4.59□□□□□ -1.68
HMCN1Q96RW7 AC006122.1-201ENST00000493323 440 ntBASIC4.59□□□□□ -1.68
HMCN1Q96RW7 AP001979.1-201ENST00000529222 751 ntBASIC4.59□□□□□ -1.68
HMCN1Q96RW7 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC4.59□□□□□ -1.68
HMCN1Q96RW7 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC4.59□□□□□ -1.68
HMCN1Q96RW7 NKAPP1-203ENST00000554109 573 ntTSL 4 BASIC4.59□□□□□ -1.68
HMCN1Q96RW7 HMOX2-213ENST00000575120 1027 ntTSL 3 BASIC4.59□□□□□ -1.68
HMCN1Q96RW7 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC4.59□□□□□ -1.68
HMCN1Q96RW7 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC4.59□□□□□ -1.68
HMCN1Q96RW7 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC4.59□□□□□ -1.68
HMCN1Q96RW7 SOX2-OT-213ENST00000492337 2508 ntTSL 2 BASIC4.59□□□□□ -1.68
HMCN1Q96RW7 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
HMCN1Q96RW7 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC4.59□□□□□ -1.68
HMCN1Q96RW7 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
HMCN1Q96RW7 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
HMCN1Q96RW7 AK6-202ENST00000380822 1648 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
HMCN1Q96RW7 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.68
HMCN1Q96RW7 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
HMCN1Q96RW7 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC4.59□□□□□ -1.68
HMCN1Q96RW7 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
HMCN1Q96RW7 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC4.59□□□□□ -1.68
HMCN1Q96RW7 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
HMCN1Q96RW7 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
HMCN1Q96RW7 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC4.59□□□□□ -1.68
HMCN1Q96RW7 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC4.59□□□□□ -1.68
HMCN1Q96RW7 PMF1-203ENST00000368279 1019 ntTSL 2 BASIC4.59□□□□□ -1.68
HMCN1Q96RW7 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
HMCN1Q96RW7 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
HMCN1Q96RW7 RBM14-205ENST00000443702 732 ntTSL 3 BASIC4.59□□□□□ -1.68
HMCN1Q96RW7 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC4.59□□□□□ -1.68
HMCN1Q96RW7 LINC00892-203ENST00000454385 686 ntTSL 3 BASIC4.59□□□□□ -1.68
HMCN1Q96RW7 FAM86JP-202ENST00000484500 988 ntBASIC4.59□□□□□ -1.68
HMCN1Q96RW7 OARD1-214ENST00000486443 764 ntTSL 3 BASIC4.59□□□□□ -1.68
HMCN1Q96RW7 AC092910.2-201ENST00000491262 348 ntBASIC4.59□□□□□ -1.68
HMCN1Q96RW7 ORAOV1P1-201ENST00000503108 395 ntBASIC4.59□□□□□ -1.68
HMCN1Q96RW7 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC4.59□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 612.6 ms