Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
AP1S3Q96PC3 AP005117.1-201ENST00000584346 1413 ntBASIC11.95□□□□□ -0.5
AP1S3Q96PC3 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
AP1S3Q96PC3 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
AP1S3Q96PC3 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
AP1S3Q96PC3 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC11.95□□□□□ -0.5
AP1S3Q96PC3 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
AP1S3Q96PC3 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC11.95□□□□□ -0.5
AP1S3Q96PC3 PI4KAP1-204ENST00000612579 1703 ntBASIC11.95□□□□□ -0.5
AP1S3Q96PC3 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC11.95□□□□□ -0.5
AP1S3Q96PC3 AC117489.1-201ENST00000625169 3217 ntBASIC11.95□□□□□ -0.5
AP1S3Q96PC3 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
AP1S3Q96PC3 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC11.95□□□□□ -0.5
AP1S3Q96PC3 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC11.95□□□□□ -0.5
AP1S3Q96PC3 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
AP1S3Q96PC3 FGFR1-211ENST00000425967 5375 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
AP1S3Q96PC3 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
AP1S3Q96PC3 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
AP1S3Q96PC3 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
AP1S3Q96PC3 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
AP1S3Q96PC3 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
AP1S3Q96PC3 MED16-201ENST00000269814 1199 ntTSL 5 BASIC11.95□□□□□ -0.5
AP1S3Q96PC3 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
AP1S3Q96PC3 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
AP1S3Q96PC3 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
AP1S3Q96PC3 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
AP1S3Q96PC3 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
AP1S3Q96PC3 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
AP1S3Q96PC3 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
AP1S3Q96PC3 HCG4-201ENST00000418983 998 ntBASIC11.95□□□□□ -0.5
AP1S3Q96PC3 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC11.95□□□□□ -0.5
AP1S3Q96PC3 TMPOP1-202ENST00000424642 1267 ntBASIC11.95□□□□□ -0.5
AP1S3Q96PC3 AP002383.4-201ENST00000442518 975 ntBASIC11.95□□□□□ -0.5
AP1S3Q96PC3 MSRA-206ENST00000521209 814 ntTSL 3 BASIC11.95□□□□□ -0.5
AP1S3Q96PC3 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC11.95□□□□□ -0.5
AP1S3Q96PC3 AC139887.3-201ENST00000568585 713 ntBASIC11.95□□□□□ -0.5
AP1S3Q96PC3 AC005412.3-201ENST00000580309 715 ntBASIC11.95□□□□□ -0.5
AP1S3Q96PC3 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC11.95□□□□□ -0.5
AP1S3Q96PC3 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
AP1S3Q96PC3 AC064862.7-201ENST00000604520 867 ntBASIC11.95□□□□□ -0.5
AP1S3Q96PC3 REXO1L3P-201ENST00000622202 1288 ntBASIC11.95□□□□□ -0.5
AP1S3Q96PC3 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
AP1S3Q96PC3 GRIP2-205ENST00000621039 7752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
AP1S3Q96PC3 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
AP1S3Q96PC3 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
AP1S3Q96PC3 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
AP1S3Q96PC3 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
AP1S3Q96PC3 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
AP1S3Q96PC3 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC11.95□□□□□ -0.5
AP1S3Q96PC3 GEMIN5-201ENST00000285873 5397 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
AP1S3Q96PC3 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC11.95□□□□□ -0.5
AP1S3Q96PC3 RBMS1-201ENST00000348849 4273 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
AP1S3Q96PC3 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC11.95□□□□□ -0.5
AP1S3Q96PC3 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
AP1S3Q96PC3 SCN8A-209ENST00000627620 5943 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
AP1S3Q96PC3 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC11.95□□□□□ -0.5
AP1S3Q96PC3 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
AP1S3Q96PC3 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
AP1S3Q96PC3 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
AP1S3Q96PC3 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
AP1S3Q96PC3 EXOC8-201ENST00000366645 5100 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
AP1S3Q96PC3 AC005840.4-201ENST00000541242 2494 ntBASIC11.95□□□□□ -0.5
AP1S3Q96PC3 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC11.95□□□□□ -0.5
AP1S3Q96PC3 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
AP1S3Q96PC3 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
AP1S3Q96PC3 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC11.95□□□□□ -0.5
AP1S3Q96PC3 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
AP1S3Q96PC3 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 KIAA1549-202ENST00000440172 12379 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 PCDHGA12-201ENST00000252085 4747 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 ARHGAP23P1-201ENST00000562773 1937 ntBASIC11.94□□□□□ -0.5
AP1S3Q96PC3 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 OR1I1-202ENST00000641398 5984 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
AP1S3Q96PC3 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC11.94□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms