Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
C9orf72Q96LT7 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.21■□□□□ 0.19
C9orf72Q96LT7 HMGN1P19-201ENST00000436976 333 ntBASIC16.21■□□□□ 0.19
C9orf72Q96LT7 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.21■□□□□ 0.19
C9orf72Q96LT7 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC16.21■□□□□ 0.19
C9orf72Q96LT7 RFPL4AP1-201ENST00000530883 850 ntBASIC16.21■□□□□ 0.19
C9orf72Q96LT7 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.21■□□□□ 0.19
C9orf72Q96LT7 RNF34-208ENST00000555076 593 ntTSL 3 BASIC16.21■□□□□ 0.19
C9orf72Q96LT7 AC243562.2-201ENST00000561247 970 ntBASIC16.21■□□□□ 0.19
C9orf72Q96LT7 AL138918.1-201ENST00000568306 659 ntBASIC16.21■□□□□ 0.19
C9orf72Q96LT7 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
C9orf72Q96LT7 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
C9orf72Q96LT7 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
C9orf72Q96LT7 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
C9orf72Q96LT7 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.21■□□□□ 0.19
C9orf72Q96LT7 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
C9orf72Q96LT7 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.21■□□□□ 0.19
C9orf72Q96LT7 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
C9orf72Q96LT7 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
C9orf72Q96LT7 AC026748.1-201ENST00000624349 3251 ntBASIC16.21■□□□□ 0.19
C9orf72Q96LT7 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
C9orf72Q96LT7 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
C9orf72Q96LT7 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.2■□□□□ 0.18
C9orf72Q96LT7 LINC01101-201ENST00000622953 1884 ntBASIC16.2■□□□□ 0.18
C9orf72Q96LT7 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
C9orf72Q96LT7 AC126755.1-201ENST00000525846 6405 ntBASIC16.2■□□□□ 0.18
C9orf72Q96LT7 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
C9orf72Q96LT7 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC16.2■□□□□ 0.18
C9orf72Q96LT7 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C9orf72Q96LT7 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
C9orf72Q96LT7 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C9orf72Q96LT7 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
C9orf72Q96LT7 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC16.2■□□□□ 0.18
C9orf72Q96LT7 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
C9orf72Q96LT7 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
C9orf72Q96LT7 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
C9orf72Q96LT7 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.2■□□□□ 0.18
C9orf72Q96LT7 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.2■□□□□ 0.18
C9orf72Q96LT7 SPDYE11-202ENST00000450699 704 ntBASIC16.2■□□□□ 0.18
C9orf72Q96LT7 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.2■□□□□ 0.18
C9orf72Q96LT7 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
C9orf72Q96LT7 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.2■□□□□ 0.18
C9orf72Q96LT7 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
C9orf72Q96LT7 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.2■□□□□ 0.18
C9orf72Q96LT7 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.2■□□□□ 0.18
C9orf72Q96LT7 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
C9orf72Q96LT7 SPDYE9P-201ENST00000570642 692 ntBASIC16.2■□□□□ 0.18
C9orf72Q96LT7 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C9orf72Q96LT7 SPDYE10P-202ENST00000612005 668 ntBASIC16.2■□□□□ 0.18
C9orf72Q96LT7 SPDYE8P-202ENST00000612377 668 ntBASIC16.2■□□□□ 0.18
C9orf72Q96LT7 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.2■□□□□ 0.18
C9orf72Q96LT7 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C9orf72Q96LT7 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
C9orf72Q96LT7 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
C9orf72Q96LT7 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C9orf72Q96LT7 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
C9orf72Q96LT7 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C9orf72Q96LT7 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C9orf72Q96LT7 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C9orf72Q96LT7 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C9orf72Q96LT7 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C9orf72Q96LT7 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
C9orf72Q96LT7 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC16.2■□□□□ 0.18
C9orf72Q96LT7 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
C9orf72Q96LT7 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
C9orf72Q96LT7 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
C9orf72Q96LT7 PCDHA3-202ENST00000532566 4594 ntBASIC16.19■□□□□ 0.18
C9orf72Q96LT7 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
C9orf72Q96LT7 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
C9orf72Q96LT7 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.19■□□□□ 0.18
C9orf72Q96LT7 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C9orf72Q96LT7 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C9orf72Q96LT7 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
C9orf72Q96LT7 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
C9orf72Q96LT7 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
C9orf72Q96LT7 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC16.19■□□□□ 0.18
C9orf72Q96LT7 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
C9orf72Q96LT7 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
C9orf72Q96LT7 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
C9orf72Q96LT7 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
C9orf72Q96LT7 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C9orf72Q96LT7 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
C9orf72Q96LT7 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C9orf72Q96LT7 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C9orf72Q96LT7 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C9orf72Q96LT7 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C9orf72Q96LT7 AL139400.1-201ENST00000366220 510 ntBASIC16.19■□□□□ 0.18
C9orf72Q96LT7 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
C9orf72Q96LT7 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C9orf72Q96LT7 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
C9orf72Q96LT7 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.19■□□□□ 0.18
C9orf72Q96LT7 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.19■□□□□ 0.18
C9orf72Q96LT7 TFAMP1-201ENST00000412727 736 ntBASIC16.19■□□□□ 0.18
C9orf72Q96LT7 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC16.19■□□□□ 0.18
C9orf72Q96LT7 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.19■□□□□ 0.18
C9orf72Q96LT7 AC023141.5-201ENST00000458585 616 ntBASIC16.19■□□□□ 0.18
C9orf72Q96LT7 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.19■□□□□ 0.18
C9orf72Q96LT7 KRT8P48-201ENST00000515599 1220 ntBASIC16.19■□□□□ 0.18
C9orf72Q96LT7 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
C9orf72Q96LT7 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms