Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IFT43Q96FT9 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
IFT43Q96FT9 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
IFT43Q96FT9 CYP4F24P-201ENST00000586049 1580 ntBASIC16.23■□□□□ 0.19
IFT43Q96FT9 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
IFT43Q96FT9 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.23■□□□□ 0.19
IFT43Q96FT9 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.23■□□□□ 0.19
IFT43Q96FT9 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.23■□□□□ 0.19
IFT43Q96FT9 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
IFT43Q96FT9 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
IFT43Q96FT9 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.23■□□□□ 0.19
IFT43Q96FT9 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC16.23■□□□□ 0.19
IFT43Q96FT9 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC16.23■□□□□ 0.19
IFT43Q96FT9 UGT1A2P-201ENST00000454886 866 ntBASIC16.23■□□□□ 0.19
IFT43Q96FT9 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
IFT43Q96FT9 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC16.23■□□□□ 0.19
IFT43Q96FT9 AL590560.3-201ENST00000623350 461 ntBASIC16.23■□□□□ 0.19
IFT43Q96FT9 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IFT43Q96FT9 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
IFT43Q96FT9 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
IFT43Q96FT9 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
IFT43Q96FT9 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IFT43Q96FT9 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
IFT43Q96FT9 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.23■□□□□ 0.19
IFT43Q96FT9 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IFT43Q96FT9 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
IFT43Q96FT9 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
IFT43Q96FT9 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC16.23■□□□□ 0.19
IFT43Q96FT9 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC16.23■□□□□ 0.19
IFT43Q96FT9 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
IFT43Q96FT9 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
IFT43Q96FT9 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.22■□□□□ 0.19
IFT43Q96FT9 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
IFT43Q96FT9 R3HDM2P2-201ENST00000401880 2116 ntBASIC16.22■□□□□ 0.19
IFT43Q96FT9 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.22■□□□□ 0.19
IFT43Q96FT9 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.22■□□□□ 0.19
IFT43Q96FT9 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
IFT43Q96FT9 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
IFT43Q96FT9 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
IFT43Q96FT9 BNIP3P1-202ENST00000550043 1585 ntBASIC16.22■□□□□ 0.19
IFT43Q96FT9 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
IFT43Q96FT9 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IFT43Q96FT9 AC100757.3-201ENST00000622361 1406 ntBASIC16.22■□□□□ 0.19
IFT43Q96FT9 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IFT43Q96FT9 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IFT43Q96FT9 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.22■□□□□ 0.19
IFT43Q96FT9 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IFT43Q96FT9 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
IFT43Q96FT9 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IFT43Q96FT9 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IFT43Q96FT9 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
IFT43Q96FT9 MTND6P24-201ENST00000440466 518 ntBASIC16.22■□□□□ 0.19
IFT43Q96FT9 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.22■□□□□ 0.19
IFT43Q96FT9 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16.22■□□□□ 0.19
IFT43Q96FT9 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
IFT43Q96FT9 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.22■□□□□ 0.19
IFT43Q96FT9 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.22■□□□□ 0.19
IFT43Q96FT9 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.22■□□□□ 0.19
IFT43Q96FT9 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IFT43Q96FT9 AC009118.2-201ENST00000613275 655 ntBASIC16.22■□□□□ 0.19
IFT43Q96FT9 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IFT43Q96FT9 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
IFT43Q96FT9 AF228730.6-201ENST00000641497 218 ntBASIC16.22■□□□□ 0.19
IFT43Q96FT9 AC084121.3-201ENST00000641716 218 ntBASIC16.22■□□□□ 0.19
IFT43Q96FT9 AC105233.6-201ENST00000642093 218 ntBASIC16.22■□□□□ 0.19
IFT43Q96FT9 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.22■□□□□ 0.19
IFT43Q96FT9 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
IFT43Q96FT9 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.22■□□□□ 0.19
IFT43Q96FT9 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
IFT43Q96FT9 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IFT43Q96FT9 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IFT43Q96FT9 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
IFT43Q96FT9 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
IFT43Q96FT9 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IFT43Q96FT9 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
IFT43Q96FT9 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC16.22■□□□□ 0.19
IFT43Q96FT9 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
IFT43Q96FT9 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
IFT43Q96FT9 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.21■□□□□ 0.19
IFT43Q96FT9 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
IFT43Q96FT9 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IFT43Q96FT9 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
IFT43Q96FT9 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
IFT43Q96FT9 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
IFT43Q96FT9 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IFT43Q96FT9 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IFT43Q96FT9 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.21■□□□□ 0.19
IFT43Q96FT9 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.21■□□□□ 0.19
IFT43Q96FT9 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
IFT43Q96FT9 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.21■□□□□ 0.19
IFT43Q96FT9 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
IFT43Q96FT9 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.21■□□□□ 0.19
IFT43Q96FT9 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.21■□□□□ 0.19
IFT43Q96FT9 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
IFT43Q96FT9 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
IFT43Q96FT9 MIR661-201ENST00000384842 89 ntBASIC16.21■□□□□ 0.19
IFT43Q96FT9 AC015922.1-201ENST00000421102 1152 ntBASIC16.21■□□□□ 0.19
IFT43Q96FT9 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.21■□□□□ 0.19
IFT43Q96FT9 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
IFT43Q96FT9 COX11-202ENST00000571584 1108 ntTSL 2 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms