Protein–RNA interactions for Protein: Q8WV44

TRIM41, E3 ubiquitin-protein ligase TRIM41, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41Q8WV44 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC26.67■■□□□ 1.86
TRIM41Q8WV44 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC26.67■■□□□ 1.86
TRIM41Q8WV44 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
TRIM41Q8WV44 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC26.67■■□□□ 1.86
TRIM41Q8WV44 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC26.67■■□□□ 1.86
TRIM41Q8WV44 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC26.67■■□□□ 1.86
TRIM41Q8WV44 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
TRIM41Q8WV44 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
TRIM41Q8WV44 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
TRIM41Q8WV44 DEK-201ENST00000244776 1441 ntTSL 2 BASIC26.66■■□□□ 1.86
TRIM41Q8WV44 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC26.66■■□□□ 1.86
TRIM41Q8WV44 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC26.66■■□□□ 1.86
TRIM41Q8WV44 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC26.66■■□□□ 1.86
TRIM41Q8WV44 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
TRIM41Q8WV44 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
TRIM41Q8WV44 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
TRIM41Q8WV44 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
TRIM41Q8WV44 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
TRIM41Q8WV44 BANP-204ENST00000393208 2283 ntTSL 2 BASIC26.66■■□□□ 1.86
TRIM41Q8WV44 RAC2-202ENST00000401529 569 ntTSL 4 BASIC26.66■■□□□ 1.86
TRIM41Q8WV44 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC26.66■■□□□ 1.86
TRIM41Q8WV44 AC004898.1-201ENST00000451057 766 ntBASIC26.66■■□□□ 1.86
TRIM41Q8WV44 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC26.66■■□□□ 1.86
TRIM41Q8WV44 CLNS1A-211ENST00000532069 898 ntTSL 3 BASIC26.66■■□□□ 1.86
TRIM41Q8WV44 CFL1-214ENST00000534769 758 ntTSL 2 BASIC26.66■■□□□ 1.86
TRIM41Q8WV44 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC26.66■■□□□ 1.86
TRIM41Q8WV44 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
TRIM41Q8WV44 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC26.66■■□□□ 1.86
TRIM41Q8WV44 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
TRIM41Q8WV44 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC26.66■■□□□ 1.86
TRIM41Q8WV44 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC26.66■■□□□ 1.86
TRIM41Q8WV44 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
TRIM41Q8WV44 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
TRIM41Q8WV44 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC26.66■■□□□ 1.86
TRIM41Q8WV44 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
TRIM41Q8WV44 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC26.66■■□□□ 1.86
TRIM41Q8WV44 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC26.65■■□□□ 1.86
TRIM41Q8WV44 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
TRIM41Q8WV44 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC26.65■■□□□ 1.86
TRIM41Q8WV44 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC26.65■■□□□ 1.86
TRIM41Q8WV44 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
TRIM41Q8WV44 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
TRIM41Q8WV44 RN7SL399P-201ENST00000471648 279 ntBASIC26.65■■□□□ 1.86
TRIM41Q8WV44 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
TRIM41Q8WV44 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
TRIM41Q8WV44 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC26.65■■□□□ 1.86
TRIM41Q8WV44 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC26.65■■□□□ 1.86
TRIM41Q8WV44 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC26.65■■□□□ 1.86
TRIM41Q8WV44 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.65■■□□□ 1.86
TRIM41Q8WV44 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
TRIM41Q8WV44 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
TRIM41Q8WV44 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
TRIM41Q8WV44 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
TRIM41Q8WV44 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
TRIM41Q8WV44 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC26.65■■□□□ 1.86
TRIM41Q8WV44 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
TRIM41Q8WV44 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
TRIM41Q8WV44 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC26.65■■□□□ 1.86
TRIM41Q8WV44 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.86
TRIM41Q8WV44 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
TRIM41Q8WV44 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
TRIM41Q8WV44 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
TRIM41Q8WV44 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
TRIM41Q8WV44 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC26.64■■□□□ 1.86
TRIM41Q8WV44 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
TRIM41Q8WV44 AL391005.1-201ENST00000623953 2435 ntBASIC26.64■■□□□ 1.86
TRIM41Q8WV44 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
TRIM41Q8WV44 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.86
TRIM41Q8WV44 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
TRIM41Q8WV44 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC26.64■■□□□ 1.86
TRIM41Q8WV44 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
TRIM41Q8WV44 IDS-203ENST00000428056 1213 ntTSL 2 BASIC26.64■■□□□ 1.86
TRIM41Q8WV44 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC26.64■■□□□ 1.86
TRIM41Q8WV44 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC26.64■■□□□ 1.86
TRIM41Q8WV44 AC125604.1-201ENST00000496255 707 ntBASIC26.64■■□□□ 1.86
TRIM41Q8WV44 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.86
TRIM41Q8WV44 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC26.64■■□□□ 1.86
TRIM41Q8WV44 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC26.64■■□□□ 1.86
TRIM41Q8WV44 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
TRIM41Q8WV44 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC26.64■■□□□ 1.85
TRIM41Q8WV44 CYP51A1P3-201ENST00000400072 1428 ntBASIC26.64■■□□□ 1.85
TRIM41Q8WV44 KRT8P22-201ENST00000562317 1415 ntBASIC26.64■■□□□ 1.85
TRIM41Q8WV44 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC26.64■■□□□ 1.85
TRIM41Q8WV44 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.85
TRIM41Q8WV44 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
TRIM41Q8WV44 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
TRIM41Q8WV44 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
TRIM41Q8WV44 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC26.63■■□□□ 1.85
TRIM41Q8WV44 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
TRIM41Q8WV44 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
TRIM41Q8WV44 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
TRIM41Q8WV44 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
TRIM41Q8WV44 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
TRIM41Q8WV44 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
TRIM41Q8WV44 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC26.63■■□□□ 1.85
TRIM41Q8WV44 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC26.63■■□□□ 1.85
TRIM41Q8WV44 AL591846.1-201ENST00000451736 433 ntBASIC26.63■■□□□ 1.85
TRIM41Q8WV44 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC26.63■■□□□ 1.85
TRIM41Q8WV44 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC26.63■■□□□ 1.85
TRIM41Q8WV44 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC26.63■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms