Protein–RNA interactions for Protein: Q8N9L1

ZIC4, Zinc finger protein ZIC 4, humanhuman

Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4Q8N9L1 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ZIC4Q8N9L1 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ZIC4Q8N9L1 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC13.83□□□□□ -0.2
ZIC4Q8N9L1 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.83□□□□□ -0.2
ZIC4Q8N9L1 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZIC4Q8N9L1 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC13.83□□□□□ -0.2
ZIC4Q8N9L1 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
ZIC4Q8N9L1 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZIC4Q8N9L1 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZIC4Q8N9L1 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ZIC4Q8N9L1 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC13.83□□□□□ -0.2
ZIC4Q8N9L1 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
ZIC4Q8N9L1 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZIC4Q8N9L1 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
ZIC4Q8N9L1 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZIC4Q8N9L1 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZIC4Q8N9L1 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
ZIC4Q8N9L1 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC13.82□□□□□ -0.2
ZIC4Q8N9L1 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.82□□□□□ -0.2
ZIC4Q8N9L1 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZIC4Q8N9L1 HYMAI-201ENST00000635591 3347 ntBASIC13.82□□□□□ -0.2
ZIC4Q8N9L1 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZIC4Q8N9L1 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZIC4Q8N9L1 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZIC4Q8N9L1 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZIC4Q8N9L1 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
ZIC4Q8N9L1 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZIC4Q8N9L1 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZIC4Q8N9L1 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ZIC4Q8N9L1 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZIC4Q8N9L1 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZIC4Q8N9L1 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZIC4Q8N9L1 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
ZIC4Q8N9L1 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
ZIC4Q8N9L1 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZIC4Q8N9L1 PIN1P1-201ENST00000412108 996 ntBASIC13.82□□□□□ -0.2
ZIC4Q8N9L1 AC098850.1-201ENST00000419919 790 ntBASIC13.82□□□□□ -0.2
ZIC4Q8N9L1 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ZIC4Q8N9L1 AC036164.1-201ENST00000570544 333 ntBASIC13.82□□□□□ -0.2
ZIC4Q8N9L1 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ZIC4Q8N9L1 AL662799.1-202ENST00000614205 422 ntBASIC13.82□□□□□ -0.2
ZIC4Q8N9L1 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.82□□□□□ -0.2
ZIC4Q8N9L1 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.82□□□□□ -0.2
ZIC4Q8N9L1 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ZIC4Q8N9L1 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
ZIC4Q8N9L1 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZIC4Q8N9L1 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
ZIC4Q8N9L1 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ZIC4Q8N9L1 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZIC4Q8N9L1 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZIC4Q8N9L1 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZIC4Q8N9L1 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
ZIC4Q8N9L1 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.82□□□□□ -0.2
ZIC4Q8N9L1 AL391825.1-201ENST00000457671 1364 ntBASIC13.82□□□□□ -0.2
ZIC4Q8N9L1 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZIC4Q8N9L1 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
ZIC4Q8N9L1 AC126177.1-201ENST00000547829 2218 ntBASIC13.82□□□□□ -0.2
ZIC4Q8N9L1 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
ZIC4Q8N9L1 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZIC4Q8N9L1 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZIC4Q8N9L1 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZIC4Q8N9L1 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZIC4Q8N9L1 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
ZIC4Q8N9L1 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC13.81□□□□□ -0.2
ZIC4Q8N9L1 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
ZIC4Q8N9L1 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZIC4Q8N9L1 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZIC4Q8N9L1 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZIC4Q8N9L1 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.81□□□□□ -0.2
ZIC4Q8N9L1 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ZIC4Q8N9L1 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZIC4Q8N9L1 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC13.81□□□□□ -0.2
ZIC4Q8N9L1 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
ZIC4Q8N9L1 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZIC4Q8N9L1 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC13.81□□□□□ -0.2
ZIC4Q8N9L1 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.81□□□□□ -0.2
ZIC4Q8N9L1 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC13.81□□□□□ -0.2
ZIC4Q8N9L1 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC13.81□□□□□ -0.2
ZIC4Q8N9L1 POLD4-211ENST00000539074 714 ntTSL 3 BASIC13.81□□□□□ -0.2
ZIC4Q8N9L1 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.81□□□□□ -0.2
ZIC4Q8N9L1 AC190387.1-201ENST00000551683 408 ntBASIC13.81□□□□□ -0.2
ZIC4Q8N9L1 AC138761.1-201ENST00000584393 385 ntBASIC13.81□□□□□ -0.2
ZIC4Q8N9L1 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.81□□□□□ -0.2
ZIC4Q8N9L1 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC13.81□□□□□ -0.2
ZIC4Q8N9L1 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC13.81□□□□□ -0.2
ZIC4Q8N9L1 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC13.81□□□□□ -0.2
ZIC4Q8N9L1 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC13.81□□□□□ -0.2
ZIC4Q8N9L1 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ZIC4Q8N9L1 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZIC4Q8N9L1 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
ZIC4Q8N9L1 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
ZIC4Q8N9L1 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZIC4Q8N9L1 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC13.81□□□□□ -0.2
ZIC4Q8N9L1 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZIC4Q8N9L1 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZIC4Q8N9L1 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
ZIC4Q8N9L1 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC13.81□□□□□ -0.2
ZIC4Q8N9L1 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.8□□□□□ -0.2
ZIC4Q8N9L1 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
ZIC4Q8N9L1 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 51.1 ms