Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
PHTF2Q8N3S3 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
PHTF2Q8N3S3 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
PHTF2Q8N3S3 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC16.23■□□□□ 0.19
PHTF2Q8N3S3 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
PHTF2Q8N3S3 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PHTF2Q8N3S3 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
PHTF2Q8N3S3 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PHTF2Q8N3S3 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PHTF2Q8N3S3 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC16.22■□□□□ 0.19
PHTF2Q8N3S3 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC16.22■□□□□ 0.19
PHTF2Q8N3S3 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.22■□□□□ 0.19
PHTF2Q8N3S3 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
PHTF2Q8N3S3 AP005117.1-202ENST00000581724 1908 ntBASIC16.22■□□□□ 0.19
PHTF2Q8N3S3 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PHTF2Q8N3S3 KRT18P64-201ENST00000434946 1219 ntBASIC16.22■□□□□ 0.19
PHTF2Q8N3S3 AC022210.1-201ENST00000449856 793 ntBASIC16.22■□□□□ 0.19
PHTF2Q8N3S3 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC16.22■□□□□ 0.19
PHTF2Q8N3S3 AC104596.2-201ENST00000512793 793 ntBASIC16.22■□□□□ 0.19
PHTF2Q8N3S3 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.22■□□□□ 0.19
PHTF2Q8N3S3 RAB43P1-201ENST00000561790 589 ntBASIC16.22■□□□□ 0.19
PHTF2Q8N3S3 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC16.22■□□□□ 0.19
PHTF2Q8N3S3 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
PHTF2Q8N3S3 AC008735.3-201ENST00000596646 500 ntBASIC16.22■□□□□ 0.19
PHTF2Q8N3S3 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.22■□□□□ 0.19
PHTF2Q8N3S3 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.22■□□□□ 0.19
PHTF2Q8N3S3 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
PHTF2Q8N3S3 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PHTF2Q8N3S3 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PHTF2Q8N3S3 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PHTF2Q8N3S3 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
PHTF2Q8N3S3 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PHTF2Q8N3S3 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
PHTF2Q8N3S3 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
PHTF2Q8N3S3 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC16.22■□□□□ 0.19
PHTF2Q8N3S3 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
PHTF2Q8N3S3 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PHTF2Q8N3S3 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PHTF2Q8N3S3 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PHTF2Q8N3S3 AP002414.2-201ENST00000591780 3365 ntBASIC16.21■□□□□ 0.19
PHTF2Q8N3S3 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
PHTF2Q8N3S3 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PHTF2Q8N3S3 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.21■□□□□ 0.19
PHTF2Q8N3S3 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC16.21■□□□□ 0.19
PHTF2Q8N3S3 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PHTF2Q8N3S3 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.21■□□□□ 0.19
PHTF2Q8N3S3 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PHTF2Q8N3S3 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PHTF2Q8N3S3 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
PHTF2Q8N3S3 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PHTF2Q8N3S3 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.21■□□□□ 0.19
PHTF2Q8N3S3 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PHTF2Q8N3S3 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PHTF2Q8N3S3 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC16.21■□□□□ 0.19
PHTF2Q8N3S3 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PHTF2Q8N3S3 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PHTF2Q8N3S3 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PHTF2Q8N3S3 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
PHTF2Q8N3S3 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PHTF2Q8N3S3 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PHTF2Q8N3S3 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
PHTF2Q8N3S3 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
PHTF2Q8N3S3 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
PHTF2Q8N3S3 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PHTF2Q8N3S3 TOMM22P5-201ENST00000416399 439 ntBASIC16.21■□□□□ 0.19
PHTF2Q8N3S3 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.21■□□□□ 0.19
PHTF2Q8N3S3 AC119751.2-201ENST00000504529 210 ntBASIC16.21■□□□□ 0.19
PHTF2Q8N3S3 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.21■□□□□ 0.19
PHTF2Q8N3S3 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.21■□□□□ 0.19
PHTF2Q8N3S3 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
PHTF2Q8N3S3 AL512343.1-201ENST00000605837 169 ntBASIC16.21■□□□□ 0.19
PHTF2Q8N3S3 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.21■□□□□ 0.19
PHTF2Q8N3S3 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
PHTF2Q8N3S3 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.21■□□□□ 0.19
PHTF2Q8N3S3 AP001282.1-201ENST00000531301 1499 ntBASIC16.21■□□□□ 0.19
PHTF2Q8N3S3 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PHTF2Q8N3S3 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
PHTF2Q8N3S3 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PHTF2Q8N3S3 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
PHTF2Q8N3S3 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
PHTF2Q8N3S3 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.18
PHTF2Q8N3S3 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
PHTF2Q8N3S3 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.2■□□□□ 0.18
PHTF2Q8N3S3 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
PHTF2Q8N3S3 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PHTF2Q8N3S3 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.2■□□□□ 0.18
PHTF2Q8N3S3 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PHTF2Q8N3S3 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC16.2■□□□□ 0.18
PHTF2Q8N3S3 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PHTF2Q8N3S3 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PHTF2Q8N3S3 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.2■□□□□ 0.18
PHTF2Q8N3S3 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PHTF2Q8N3S3 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
PHTF2Q8N3S3 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PHTF2Q8N3S3 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PHTF2Q8N3S3 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.2■□□□□ 0.18
PHTF2Q8N3S3 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.2■□□□□ 0.18
PHTF2Q8N3S3 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PHTF2Q8N3S3 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PHTF2Q8N3S3 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms