Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC60Q8IWA6 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
CCDC60Q8IWA6 AP001582.1-201ENST00000525856 295 ntBASIC17.33■□□□□ 0.36
CCDC60Q8IWA6 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.33■□□□□ 0.36
CCDC60Q8IWA6 AC009486.1-201ENST00000569860 813 ntBASIC17.33■□□□□ 0.36
CCDC60Q8IWA6 MIR4259-201ENST00000584466 101 ntBASIC17.33■□□□□ 0.36
CCDC60Q8IWA6 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC17.33■□□□□ 0.36
CCDC60Q8IWA6 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC17.33■□□□□ 0.36
CCDC60Q8IWA6 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC17.33■□□□□ 0.36
CCDC60Q8IWA6 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC60Q8IWA6 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.33■□□□□ 0.36
CCDC60Q8IWA6 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC60Q8IWA6 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC17.33■□□□□ 0.36
CCDC60Q8IWA6 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC60Q8IWA6 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
CCDC60Q8IWA6 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC60Q8IWA6 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC17.33■□□□□ 0.36
CCDC60Q8IWA6 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC60Q8IWA6 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CCDC60Q8IWA6 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC60Q8IWA6 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC60Q8IWA6 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.33■□□□□ 0.36
CCDC60Q8IWA6 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC60Q8IWA6 AL138799.1-201ENST00000448213 1675 ntBASIC17.32■□□□□ 0.36
CCDC60Q8IWA6 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC60Q8IWA6 TP73-213ENST00000604479 1623 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC60Q8IWA6 AMT-224ENST00000635808 1610 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC60Q8IWA6 LOX-206ENST00000639739 1626 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC60Q8IWA6 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC60Q8IWA6 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CCDC60Q8IWA6 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC60Q8IWA6 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC60Q8IWA6 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CCDC60Q8IWA6 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC60Q8IWA6 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC60Q8IWA6 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC60Q8IWA6 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CCDC60Q8IWA6 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC60Q8IWA6 AC005229.1-201ENST00000392885 409 ntBASIC17.32■□□□□ 0.36
CCDC60Q8IWA6 BAATP1-201ENST00000412284 1225 ntBASIC17.32■□□□□ 0.36
CCDC60Q8IWA6 AC007274.1-201ENST00000439805 662 ntBASIC17.32■□□□□ 0.36
CCDC60Q8IWA6 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC17.32■□□□□ 0.36
CCDC60Q8IWA6 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CCDC60Q8IWA6 AC106760.1-201ENST00000508690 800 ntBASIC17.32■□□□□ 0.36
CCDC60Q8IWA6 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC60Q8IWA6 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC60Q8IWA6 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC60Q8IWA6 MIR6805-201ENST00000615055 62 ntBASIC17.32■□□□□ 0.36
CCDC60Q8IWA6 MIR6775-201ENST00000617557 69 ntBASIC17.32■□□□□ 0.36
CCDC60Q8IWA6 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC60Q8IWA6 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC60Q8IWA6 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC60Q8IWA6 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CCDC60Q8IWA6 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
CCDC60Q8IWA6 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC60Q8IWA6 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC60Q8IWA6 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC60Q8IWA6 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC60Q8IWA6 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC60Q8IWA6 AC092850.2-201ENST00000623821 2697 ntBASIC17.32■□□□□ 0.36
CCDC60Q8IWA6 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
CCDC60Q8IWA6 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CCDC60Q8IWA6 AC008894.3-201ENST00000624324 3103 ntBASIC17.32■□□□□ 0.36
CCDC60Q8IWA6 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC17.32■□□□□ 0.36
CCDC60Q8IWA6 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC60Q8IWA6 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CCDC60Q8IWA6 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC60Q8IWA6 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC60Q8IWA6 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC60Q8IWA6 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC60Q8IWA6 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC60Q8IWA6 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC60Q8IWA6 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CCDC60Q8IWA6 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC60Q8IWA6 AC134312.5-201ENST00000568031 1313 ntBASIC17.31■□□□□ 0.36
CCDC60Q8IWA6 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC60Q8IWA6 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC60Q8IWA6 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC60Q8IWA6 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC60Q8IWA6 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC60Q8IWA6 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.31■□□□□ 0.36
CCDC60Q8IWA6 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC60Q8IWA6 KRT43P-201ENST00000434019 910 ntBASIC17.31■□□□□ 0.36
CCDC60Q8IWA6 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC60Q8IWA6 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.31■□□□□ 0.36
CCDC60Q8IWA6 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC60Q8IWA6 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC60Q8IWA6 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
CCDC60Q8IWA6 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC60Q8IWA6 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC60Q8IWA6 AL022328.1-201ENST00000610050 478 ntBASIC17.31■□□□□ 0.36
CCDC60Q8IWA6 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC60Q8IWA6 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC60Q8IWA6 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC60Q8IWA6 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC60Q8IWA6 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC60Q8IWA6 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC17.31■□□□□ 0.36
CCDC60Q8IWA6 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CCDC60Q8IWA6 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CCDC60Q8IWA6 PDIA3P1-201ENST00000471856 1510 ntBASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms