Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CNKSR3Q6P9H4 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.63■□□□□ 0.25
CNKSR3Q6P9H4 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.63■□□□□ 0.25
CNKSR3Q6P9H4 AC124067.4-201ENST00000519691 2379 ntBASIC16.63■□□□□ 0.25
CNKSR3Q6P9H4 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNKSR3Q6P9H4 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CNKSR3Q6P9H4 HLA-DQB2-229ENST00000411527 1059 ntBASIC16.63■□□□□ 0.25
CNKSR3Q6P9H4 CHMP1AP1-201ENST00000445563 662 ntBASIC16.63■□□□□ 0.25
CNKSR3Q6P9H4 HIST2H2BB-201ENST00000449108 381 ntBASIC16.63■□□□□ 0.25
CNKSR3Q6P9H4 AC005740.2-201ENST00000511085 419 ntBASIC16.63■□□□□ 0.25
CNKSR3Q6P9H4 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC16.63■□□□□ 0.25
CNKSR3Q6P9H4 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC16.63■□□□□ 0.25
CNKSR3Q6P9H4 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC16.63■□□□□ 0.25
CNKSR3Q6P9H4 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNKSR3Q6P9H4 AC091544.8-201ENST00000619490 361 ntBASIC16.63■□□□□ 0.25
CNKSR3Q6P9H4 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC16.63■□□□□ 0.25
CNKSR3Q6P9H4 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.63■□□□□ 0.25
CNKSR3Q6P9H4 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNKSR3Q6P9H4 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC16.63■□□□□ 0.25
CNKSR3Q6P9H4 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.63■□□□□ 0.25
CNKSR3Q6P9H4 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CNKSR3Q6P9H4 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.63■□□□□ 0.25
CNKSR3Q6P9H4 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.63■□□□□ 0.25
CNKSR3Q6P9H4 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNKSR3Q6P9H4 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNKSR3Q6P9H4 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNKSR3Q6P9H4 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CNKSR3Q6P9H4 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.62■□□□□ 0.25
CNKSR3Q6P9H4 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CNKSR3Q6P9H4 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CNKSR3Q6P9H4 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CNKSR3Q6P9H4 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CNKSR3Q6P9H4 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.62■□□□□ 0.25
CNKSR3Q6P9H4 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CNKSR3Q6P9H4 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
CNKSR3Q6P9H4 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CNKSR3Q6P9H4 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC16.62■□□□□ 0.25
CNKSR3Q6P9H4 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC16.62■□□□□ 0.25
CNKSR3Q6P9H4 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC16.62■□□□□ 0.25
CNKSR3Q6P9H4 Z97180.1-201ENST00000445173 988 ntBASIC16.62■□□□□ 0.25
CNKSR3Q6P9H4 MAGEA5-201ENST00000446757 942 ntBASIC16.62■□□□□ 0.25
CNKSR3Q6P9H4 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNKSR3Q6P9H4 RN7SL11P-201ENST00000471305 293 ntBASIC16.62■□□□□ 0.25
CNKSR3Q6P9H4 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC16.62■□□□□ 0.25
CNKSR3Q6P9H4 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC16.62■□□□□ 0.25
CNKSR3Q6P9H4 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC16.62■□□□□ 0.25
CNKSR3Q6P9H4 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC16.62■□□□□ 0.25
CNKSR3Q6P9H4 AP003171.2-201ENST00000528208 925 ntBASIC16.62■□□□□ 0.25
CNKSR3Q6P9H4 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC16.62■□□□□ 0.25
CNKSR3Q6P9H4 AC106820.3-201ENST00000561653 397 ntBASIC16.62■□□□□ 0.25
CNKSR3Q6P9H4 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CNKSR3Q6P9H4 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC16.62■□□□□ 0.25
CNKSR3Q6P9H4 AL023803.2-201ENST00000620080 638 ntBASIC16.62■□□□□ 0.25
CNKSR3Q6P9H4 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.62■□□□□ 0.25
CNKSR3Q6P9H4 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CNKSR3Q6P9H4 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.62■□□□□ 0.25
CNKSR3Q6P9H4 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNKSR3Q6P9H4 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.62■□□□□ 0.25
CNKSR3Q6P9H4 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNKSR3Q6P9H4 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CNKSR3Q6P9H4 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNKSR3Q6P9H4 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.62■□□□□ 0.25
CNKSR3Q6P9H4 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CNKSR3Q6P9H4 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNKSR3Q6P9H4 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNKSR3Q6P9H4 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CNKSR3Q6P9H4 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNKSR3Q6P9H4 AGGF1P2-201ENST00000426656 2106 ntBASIC16.61■□□□□ 0.25
CNKSR3Q6P9H4 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CNKSR3Q6P9H4 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC16.61■□□□□ 0.25
CNKSR3Q6P9H4 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CNKSR3Q6P9H4 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNKSR3Q6P9H4 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.61■□□□□ 0.25
CNKSR3Q6P9H4 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CNKSR3Q6P9H4 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CNKSR3Q6P9H4 CRCP-204ENST00000398684 492 ntTSL 2 BASIC16.61■□□□□ 0.25
CNKSR3Q6P9H4 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC16.61■□□□□ 0.25
CNKSR3Q6P9H4 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC16.61■□□□□ 0.25
CNKSR3Q6P9H4 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC16.61■□□□□ 0.25
CNKSR3Q6P9H4 AC100850.1-201ENST00000506768 649 ntBASIC16.61■□□□□ 0.25
CNKSR3Q6P9H4 AC022217.1-201ENST00000521069 738 ntBASIC16.61■□□□□ 0.25
CNKSR3Q6P9H4 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.61■□□□□ 0.25
CNKSR3Q6P9H4 RN7SL774P-201ENST00000577467 290 ntBASIC16.61■□□□□ 0.25
CNKSR3Q6P9H4 NAT9-224ENST00000583757 583 ntTSL 3 BASIC16.61■□□□□ 0.25
CNKSR3Q6P9H4 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
CNKSR3Q6P9H4 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC16.61■□□□□ 0.25
CNKSR3Q6P9H4 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
CNKSR3Q6P9H4 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
CNKSR3Q6P9H4 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CNKSR3Q6P9H4 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CNKSR3Q6P9H4 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNKSR3Q6P9H4 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CNKSR3Q6P9H4 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.61■□□□□ 0.25
CNKSR3Q6P9H4 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNKSR3Q6P9H4 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CNKSR3Q6P9H4 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC16.61■□□□□ 0.25
CNKSR3Q6P9H4 AC011676.5-201ENST00000624864 2660 ntBASIC16.61■□□□□ 0.25
CNKSR3Q6P9H4 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC16.61■□□□□ 0.25
CNKSR3Q6P9H4 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNKSR3Q6P9H4 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms