Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC10.25□□□□□ -0.77
VPS13DQ5THJ4 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC10.25□□□□□ -0.77
VPS13DQ5THJ4 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
VPS13DQ5THJ4 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
VPS13DQ5THJ4 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC10.25□□□□□ -0.77
VPS13DQ5THJ4 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
VPS13DQ5THJ4 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC10.25□□□□□ -0.77
VPS13DQ5THJ4 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
VPS13DQ5THJ4 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC10.25□□□□□ -0.77
VPS13DQ5THJ4 NPM1P43-201ENST00000558669 786 ntBASIC10.25□□□□□ -0.77
VPS13DQ5THJ4 AC135983.4-201ENST00000564116 1262 ntBASIC10.25□□□□□ -0.77
VPS13DQ5THJ4 AL645728.2-202ENST00000641679 227 ntBASIC10.25□□□□□ -0.77
VPS13DQ5THJ4 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
VPS13DQ5THJ4 SUPT20HL2-201ENST00000486479 2409 ntBASIC10.25□□□□□ -0.77
VPS13DQ5THJ4 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
VPS13DQ5THJ4 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
VPS13DQ5THJ4 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
VPS13DQ5THJ4 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
VPS13DQ5THJ4 NKILA-202ENST00000614771 2598 ntBASIC10.24□□□□□ -0.77
VPS13DQ5THJ4 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC10.24□□□□□ -0.77
VPS13DQ5THJ4 RTN3P1-201ENST00000536295 711 ntBASIC10.24□□□□□ -0.77
VPS13DQ5THJ4 INO80C-210ENST00000590757 595 ntTSL 2 BASIC10.24□□□□□ -0.77
VPS13DQ5THJ4 AL353726.2-201ENST00000623259 884 ntBASIC10.24□□□□□ -0.77
VPS13DQ5THJ4 AC025262.2-201ENST00000623975 1056 ntBASIC10.24□□□□□ -0.77
VPS13DQ5THJ4 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
VPS13DQ5THJ4 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
VPS13DQ5THJ4 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
VPS13DQ5THJ4 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
VPS13DQ5THJ4 AC136759.1-202ENST00000530858 2194 ntBASIC10.24□□□□□ -0.77
VPS13DQ5THJ4 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
VPS13DQ5THJ4 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
VPS13DQ5THJ4 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
VPS13DQ5THJ4 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC10.24□□□□□ -0.77
VPS13DQ5THJ4 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC10.24□□□□□ -0.77
VPS13DQ5THJ4 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC10.24□□□□□ -0.77
VPS13DQ5THJ4 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC10.24□□□□□ -0.77
VPS13DQ5THJ4 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC10.24□□□□□ -0.77
VPS13DQ5THJ4 AL805961.1-201ENST00000642026 753 ntBASIC10.24□□□□□ -0.77
VPS13DQ5THJ4 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
VPS13DQ5THJ4 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC10.24□□□□□ -0.77
VPS13DQ5THJ4 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
VPS13DQ5THJ4 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
VPS13DQ5THJ4 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC10.24□□□□□ -0.77
VPS13DQ5THJ4 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
VPS13DQ5THJ4 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
VPS13DQ5THJ4 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC10.24□□□□□ -0.77
VPS13DQ5THJ4 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
VPS13DQ5THJ4 TNRC18P3-201ENST00000441896 2691 ntBASIC10.24□□□□□ -0.77
VPS13DQ5THJ4 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
VPS13DQ5THJ4 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
VPS13DQ5THJ4 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
VPS13DQ5THJ4 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
VPS13DQ5THJ4 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
VPS13DQ5THJ4 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
VPS13DQ5THJ4 DDX39A-201ENST00000242776 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
VPS13DQ5THJ4 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC10.24□□□□□ -0.77
VPS13DQ5THJ4 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC10.24□□□□□ -0.77
VPS13DQ5THJ4 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
VPS13DQ5THJ4 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC10.24□□□□□ -0.77
VPS13DQ5THJ4 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
VPS13DQ5THJ4 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
VPS13DQ5THJ4 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
VPS13DQ5THJ4 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
VPS13DQ5THJ4 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
VPS13DQ5THJ4 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
VPS13DQ5THJ4 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
VPS13DQ5THJ4 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC10.24□□□□□ -0.77
VPS13DQ5THJ4 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC10.24□□□□□ -0.77
VPS13DQ5THJ4 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
VPS13DQ5THJ4 FGFR3P1-201ENST00000449999 601 ntBASIC10.24□□□□□ -0.77
VPS13DQ5THJ4 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
VPS13DQ5THJ4 AC020922.3-201ENST00000595064 547 ntBASIC10.24□□□□□ -0.77
VPS13DQ5THJ4 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC10.24□□□□□ -0.77
VPS13DQ5THJ4 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC10.23□□□□□ -0.77
VPS13DQ5THJ4 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
VPS13DQ5THJ4 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
VPS13DQ5THJ4 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
VPS13DQ5THJ4 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC10.23□□□□□ -0.77
VPS13DQ5THJ4 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
VPS13DQ5THJ4 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
VPS13DQ5THJ4 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC10.23□□□□□ -0.77
VPS13DQ5THJ4 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
VPS13DQ5THJ4 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
VPS13DQ5THJ4 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
VPS13DQ5THJ4 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
VPS13DQ5THJ4 AC055811.4-201ENST00000624039 1754 ntBASIC10.23□□□□□ -0.77
VPS13DQ5THJ4 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
VPS13DQ5THJ4 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC10.23□□□□□ -0.77
VPS13DQ5THJ4 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC10.23□□□□□ -0.77
VPS13DQ5THJ4 PFN2-205ENST00000461868 613 ntTSL 2 BASIC10.23□□□□□ -0.77
VPS13DQ5THJ4 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC10.23□□□□□ -0.77
VPS13DQ5THJ4 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC10.23□□□□□ -0.77
VPS13DQ5THJ4 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC10.23□□□□□ -0.77
VPS13DQ5THJ4 AC100757.4-201ENST00000626934 759 ntBASIC10.23□□□□□ -0.77
VPS13DQ5THJ4 PCDHB19P-201ENST00000570871 2371 ntBASIC10.23□□□□□ -0.77
VPS13DQ5THJ4 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
VPS13DQ5THJ4 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
VPS13DQ5THJ4 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
VPS13DQ5THJ4 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
VPS13DQ5THJ4 MBLAC2-202ENST00000514906 1936 ntBASIC10.23□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms