Protein–RNA interactions for Protein: P68133

ACTA1, Actin, alpha skeletal muscle, humanhuman

Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1P68133 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ACTA1P68133 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
ACTA1P68133 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ACTA1P68133 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.03□□□□□ -0.16
ACTA1P68133 IGHV3-22-201ENST00000520721 359 ntBASIC14.03□□□□□ -0.16
ACTA1P68133 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.03□□□□□ -0.16
ACTA1P68133 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC14.03□□□□□ -0.16
ACTA1P68133 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ACTA1P68133 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.03□□□□□ -0.16
ACTA1P68133 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.03□□□□□ -0.16
ACTA1P68133 AC026979.3-201ENST00000607315 403 ntBASIC14.03□□□□□ -0.16
ACTA1P68133 Z83851.2-201ENST00000609564 659 ntBASIC14.03□□□□□ -0.16
ACTA1P68133 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC14.03□□□□□ -0.16
ACTA1P68133 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ACTA1P68133 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
ACTA1P68133 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
ACTA1P68133 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
ACTA1P68133 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.03□□□□□ -0.16
ACTA1P68133 GRK6P1-201ENST00000400595 1711 ntBASIC14.03□□□□□ -0.16
ACTA1P68133 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ACTA1P68133 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ACTA1P68133 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.03□□□□□ -0.16
ACTA1P68133 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ACTA1P68133 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.03□□□□□ -0.16
ACTA1P68133 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ACTA1P68133 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ACTA1P68133 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.03□□□□□ -0.16
ACTA1P68133 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ACTA1P68133 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ACTA1P68133 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.03□□□□□ -0.16
ACTA1P68133 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
ACTA1P68133 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
ACTA1P68133 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
ACTA1P68133 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.03□□□□□ -0.16
ACTA1P68133 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ACTA1P68133 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ACTA1P68133 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.02□□□□□ -0.16
ACTA1P68133 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.02□□□□□ -0.16
ACTA1P68133 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.02□□□□□ -0.16
ACTA1P68133 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.02□□□□□ -0.16
ACTA1P68133 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ACTA1P68133 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
ACTA1P68133 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
ACTA1P68133 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ACTA1P68133 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.02□□□□□ -0.16
ACTA1P68133 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
ACTA1P68133 CYP4F24P-201ENST00000586049 1580 ntBASIC14.02□□□□□ -0.16
ACTA1P68133 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ACTA1P68133 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.02□□□□□ -0.16
ACTA1P68133 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
ACTA1P68133 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
ACTA1P68133 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
ACTA1P68133 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ACTA1P68133 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ACTA1P68133 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ACTA1P68133 FAM220BP-201ENST00000377689 816 ntBASIC14.02□□□□□ -0.17
ACTA1P68133 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
ACTA1P68133 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ACTA1P68133 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC14.02□□□□□ -0.17
ACTA1P68133 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.02□□□□□ -0.17
ACTA1P68133 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC14.02□□□□□ -0.17
ACTA1P68133 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ACTA1P68133 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC14.02□□□□□ -0.17
ACTA1P68133 AL138918.1-201ENST00000568306 659 ntBASIC14.02□□□□□ -0.17
ACTA1P68133 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.02□□□□□ -0.17
ACTA1P68133 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.02□□□□□ -0.17
ACTA1P68133 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC14.02□□□□□ -0.17
ACTA1P68133 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ACTA1P68133 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.02□□□□□ -0.17
ACTA1P68133 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC14.02□□□□□ -0.17
ACTA1P68133 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
ACTA1P68133 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ACTA1P68133 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
ACTA1P68133 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
ACTA1P68133 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ACTA1P68133 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ACTA1P68133 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.02□□□□□ -0.17
ACTA1P68133 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
ACTA1P68133 LINC00552-201ENST00000625151 2579 ntBASIC14.02□□□□□ -0.17
ACTA1P68133 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC14.02□□□□□ -0.17
ACTA1P68133 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
ACTA1P68133 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC14.02□□□□□ -0.17
ACTA1P68133 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
ACTA1P68133 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
ACTA1P68133 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ACTA1P68133 AC007191.1-201ENST00000623179 2995 ntBASIC14.01□□□□□ -0.17
ACTA1P68133 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.01□□□□□ -0.17
ACTA1P68133 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
ACTA1P68133 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
ACTA1P68133 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ACTA1P68133 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
ACTA1P68133 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ACTA1P68133 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ACTA1P68133 HLA-A-201ENST00000376802 1334 ntBASIC14.01□□□□□ -0.17
ACTA1P68133 AKAP8P1-201ENST00000434743 1349 ntBASIC14.01□□□□□ -0.17
ACTA1P68133 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ACTA1P68133 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
ACTA1P68133 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ACTA1P68133 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
ACTA1P68133 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms