Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TPM4P67936 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TPM4P67936 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TPM4P67936 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TPM4P67936 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TPM4P67936 STK33-217ENST00000534493 1895 ntTSL 2 BASIC17.65■□□□□ 0.42
TPM4P67936 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TPM4P67936 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TPM4P67936 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TPM4P67936 AC004987.2-201ENST00000395959 1148 ntBASIC17.65■□□□□ 0.42
TPM4P67936 IGLL3P-201ENST00000412472 434 ntBASIC17.65■□□□□ 0.42
TPM4P67936 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.65■□□□□ 0.42
TPM4P67936 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.65■□□□□ 0.42
TPM4P67936 UNC93B6-202ENST00000528242 690 ntBASIC17.65■□□□□ 0.42
TPM4P67936 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC17.65■□□□□ 0.42
TPM4P67936 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
TPM4P67936 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.65■□□□□ 0.42
TPM4P67936 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.65■□□□□ 0.42
TPM4P67936 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.65■□□□□ 0.42
TPM4P67936 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC17.65■□□□□ 0.42
TPM4P67936 AC010507.1-201ENST00000633895 436 ntBASIC17.65■□□□□ 0.42
TPM4P67936 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
TPM4P67936 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TPM4P67936 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
TPM4P67936 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TPM4P67936 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TPM4P67936 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TPM4P67936 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.65■□□□□ 0.42
TPM4P67936 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TPM4P67936 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TPM4P67936 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
TPM4P67936 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
TPM4P67936 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
TPM4P67936 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
TPM4P67936 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.42
TPM4P67936 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC17.64■□□□□ 0.42
TPM4P67936 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC17.64■□□□□ 0.42
TPM4P67936 AC007686.3-201ENST00000619017 3487 ntBASIC17.64■□□□□ 0.42
TPM4P67936 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
TPM4P67936 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
TPM4P67936 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC17.64■□□□□ 0.41
TPM4P67936 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TPM4P67936 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
TPM4P67936 STRN-202ENST00000379213 2254 ntTSL 5 BASIC17.64■□□□□ 0.41
TPM4P67936 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC17.64■□□□□ 0.41
TPM4P67936 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TPM4P67936 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TPM4P67936 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TPM4P67936 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TPM4P67936 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC17.64■□□□□ 0.41
TPM4P67936 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TPM4P67936 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
TPM4P67936 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.64■□□□□ 0.41
TPM4P67936 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
TPM4P67936 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TPM4P67936 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.64■□□□□ 0.41
TPM4P67936 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC17.64■□□□□ 0.41
TPM4P67936 RHOQP3-201ENST00000437982 621 ntBASIC17.64■□□□□ 0.41
TPM4P67936 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.64■□□□□ 0.41
TPM4P67936 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TPM4P67936 AC098859.1-201ENST00000502915 1238 ntBASIC17.64■□□□□ 0.41
TPM4P67936 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TPM4P67936 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC17.64■□□□□ 0.41
TPM4P67936 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TPM4P67936 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.64■□□□□ 0.41
TPM4P67936 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TPM4P67936 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
TPM4P67936 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TPM4P67936 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
TPM4P67936 FGD5P1-202ENST00000614866 2498 ntBASIC17.64■□□□□ 0.41
TPM4P67936 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC17.64■□□□□ 0.41
TPM4P67936 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TPM4P67936 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC17.64■□□□□ 0.41
TPM4P67936 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
TPM4P67936 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
TPM4P67936 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
TPM4P67936 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC17.63■□□□□ 0.41
TPM4P67936 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TPM4P67936 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.63■□□□□ 0.41
TPM4P67936 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TPM4P67936 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
TPM4P67936 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TPM4P67936 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.63■□□□□ 0.41
TPM4P67936 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TPM4P67936 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
TPM4P67936 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
TPM4P67936 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
TPM4P67936 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.63■□□□□ 0.41
TPM4P67936 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TPM4P67936 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
TPM4P67936 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.63■□□□□ 0.41
TPM4P67936 HCG4B-203ENST00000450128 991 ntBASIC17.63■□□□□ 0.41
TPM4P67936 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.63■□□□□ 0.41
TPM4P67936 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.63■□□□□ 0.41
TPM4P67936 FAM215A-202ENST00000632077 792 ntBASIC17.63■□□□□ 0.41
TPM4P67936 BANP-203ENST00000393207 2438 ntTSL 2 BASIC17.63■□□□□ 0.41
TPM4P67936 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
TPM4P67936 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC17.63■□□□□ 0.41
TPM4P67936 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
TPM4P67936 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms