Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CXCR4P61073 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CXCR4P61073 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CXCR4P61073 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
CXCR4P61073 DDT-204ENST00000404092 805 ntTSL 3 BASIC14.33□□□□□ -0.12
CXCR4P61073 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC14.33□□□□□ -0.12
CXCR4P61073 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC14.33□□□□□ -0.12
CXCR4P61073 RPL28-209ENST00000560055 670 ntTSL 3 BASIC14.33□□□□□ -0.12
CXCR4P61073 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.33□□□□□ -0.12
CXCR4P61073 FAM215A-202ENST00000632077 792 ntBASIC14.33□□□□□ -0.12
CXCR4P61073 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CXCR4P61073 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC14.33□□□□□ -0.12
CXCR4P61073 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CXCR4P61073 AC092135.3-201ENST00000624151 1846 ntBASIC14.33□□□□□ -0.12
CXCR4P61073 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.33□□□□□ -0.12
CXCR4P61073 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.33□□□□□ -0.12
CXCR4P61073 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CXCR4P61073 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CXCR4P61073 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
CXCR4P61073 AL928921.2-201ENST00000641325 2442 ntBASIC14.33□□□□□ -0.12
CXCR4P61073 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CXCR4P61073 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
CXCR4P61073 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CXCR4P61073 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CXCR4P61073 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
CXCR4P61073 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CXCR4P61073 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CXCR4P61073 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CXCR4P61073 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CXCR4P61073 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
CXCR4P61073 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
CXCR4P61073 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
CXCR4P61073 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CXCR4P61073 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC14.32□□□□□ -0.12
CXCR4P61073 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
CXCR4P61073 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CXCR4P61073 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC14.32□□□□□ -0.12
CXCR4P61073 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.32□□□□□ -0.12
CXCR4P61073 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.32□□□□□ -0.12
CXCR4P61073 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CXCR4P61073 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CXCR4P61073 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.32□□□□□ -0.12
CXCR4P61073 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CXCR4P61073 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CXCR4P61073 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CXCR4P61073 BNIP3P1-202ENST00000550043 1585 ntBASIC14.32□□□□□ -0.12
CXCR4P61073 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.32□□□□□ -0.12
CXCR4P61073 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CXCR4P61073 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CXCR4P61073 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CXCR4P61073 VN2R19P-201ENST00000442399 1052 ntBASIC14.32□□□□□ -0.12
CXCR4P61073 AC109635.5-201ENST00000533593 962 ntBASIC14.32□□□□□ -0.12
CXCR4P61073 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.32□□□□□ -0.12
CXCR4P61073 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
CXCR4P61073 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.32□□□□□ -0.12
CXCR4P61073 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CXCR4P61073 AL009183.1-201ENST00000603760 355 ntBASIC14.32□□□□□ -0.12
CXCR4P61073 AL078644.1-201ENST00000609881 752 ntBASIC14.32□□□□□ -0.12
CXCR4P61073 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.32□□□□□ -0.12
CXCR4P61073 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC14.32□□□□□ -0.12
CXCR4P61073 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CXCR4P61073 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
CXCR4P61073 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CXCR4P61073 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CXCR4P61073 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CXCR4P61073 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.32□□□□□ -0.12
CXCR4P61073 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
CXCR4P61073 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.32□□□□□ -0.12
CXCR4P61073 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CXCR4P61073 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CXCR4P61073 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CXCR4P61073 REXO1L2P-201ENST00000425429 2069 ntBASIC14.32□□□□□ -0.12
CXCR4P61073 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
CXCR4P61073 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CXCR4P61073 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CXCR4P61073 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.32□□□□□ -0.12
CXCR4P61073 AC073439.1-201ENST00000624121 1774 ntBASIC14.32□□□□□ -0.12
CXCR4P61073 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CXCR4P61073 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CXCR4P61073 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
CXCR4P61073 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CXCR4P61073 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CXCR4P61073 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.31□□□□□ -0.12
CXCR4P61073 MIR600HG-201ENST00000449175 5984 ntBASIC14.31□□□□□ -0.12
CXCR4P61073 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.31□□□□□ -0.12
CXCR4P61073 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CXCR4P61073 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
CXCR4P61073 AC113367.3-201ENST00000508316 1912 ntBASIC14.31□□□□□ -0.12
CXCR4P61073 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CXCR4P61073 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
CXCR4P61073 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CXCR4P61073 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CXCR4P61073 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CXCR4P61073 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.31□□□□□ -0.12
CXCR4P61073 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CXCR4P61073 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CXCR4P61073 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CXCR4P61073 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.31□□□□□ -0.12
CXCR4P61073 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.31□□□□□ -0.12
CXCR4P61073 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms