Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
CDH11P55287 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
CDH11P55287 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
CDH11P55287 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDH11P55287 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
CDH11P55287 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.45□□□□□ -0.1
CDH11P55287 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
CDH11P55287 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDH11P55287 AC134407.2-201ENST00000625089 1978 ntBASIC14.45□□□□□ -0.1
CDH11P55287 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH11P55287 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDH11P55287 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.45□□□□□ -0.1
CDH11P55287 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDH11P55287 C18orf15-201ENST00000623680 2534 ntBASIC14.45□□□□□ -0.1
CDH11P55287 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.45□□□□□ -0.1
CDH11P55287 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
CDH11P55287 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH11P55287 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH11P55287 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CDH11P55287 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC14.45□□□□□ -0.1
CDH11P55287 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDH11P55287 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC14.45□□□□□ -0.1
CDH11P55287 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.45□□□□□ -0.1
CDH11P55287 MIR4321-201ENST00000592276 80 ntBASIC14.45□□□□□ -0.1
CDH11P55287 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
CDH11P55287 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC14.45□□□□□ -0.1
CDH11P55287 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.45□□□□□ -0.1
CDH11P55287 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.45□□□□□ -0.1
CDH11P55287 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
CDH11P55287 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.45□□□□□ -0.1
CDH11P55287 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH11P55287 AC112693.3-201ENST00000624819 1983 ntBASIC14.45□□□□□ -0.1
CDH11P55287 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH11P55287 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH11P55287 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH11P55287 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
CDH11P55287 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDH11P55287 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH11P55287 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
CDH11P55287 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDH11P55287 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDH11P55287 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
CDH11P55287 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
CDH11P55287 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
CDH11P55287 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH11P55287 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CDH11P55287 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.44□□□□□ -0.1
CDH11P55287 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
CDH11P55287 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH11P55287 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.44□□□□□ -0.1
CDH11P55287 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH11P55287 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.44□□□□□ -0.1
CDH11P55287 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH11P55287 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH11P55287 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CDH11P55287 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC14.44□□□□□ -0.1
CDH11P55287 HNRNPFP1-201ENST00000391730 1133 ntBASIC14.44□□□□□ -0.1
CDH11P55287 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH11P55287 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.44□□□□□ -0.1
CDH11P55287 FAM86GP-201ENST00000448322 971 ntBASIC14.44□□□□□ -0.1
CDH11P55287 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
CDH11P55287 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.44□□□□□ -0.1
CDH11P55287 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
CDH11P55287 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
CDH11P55287 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.44□□□□□ -0.1
CDH11P55287 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.44□□□□□ -0.1
CDH11P55287 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.44□□□□□ -0.1
CDH11P55287 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH11P55287 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH11P55287 AC091951.1-201ENST00000512854 2465 ntBASIC14.44□□□□□ -0.1
CDH11P55287 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH11P55287 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
CDH11P55287 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH11P55287 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH11P55287 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.44□□□□□ -0.1
CDH11P55287 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CDH11P55287 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC14.44□□□□□ -0.1
CDH11P55287 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
CDH11P55287 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH11P55287 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
CDH11P55287 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH11P55287 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH11P55287 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
CDH11P55287 AC106881.1-201ENST00000605849 3329 ntBASIC14.44□□□□□ -0.1
CDH11P55287 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.44□□□□□ -0.1
CDH11P55287 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH11P55287 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.44□□□□□ -0.1
CDH11P55287 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH11P55287 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
CDH11P55287 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.44□□□□□ -0.1
CDH11P55287 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH11P55287 SBF1P1-201ENST00000444527 5631 ntBASIC14.43□□□□□ -0.1
CDH11P55287 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
CDH11P55287 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH11P55287 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC14.43□□□□□ -0.1
CDH11P55287 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH11P55287 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC14.43□□□□□ -0.1
CDH11P55287 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
CDH11P55287 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.43□□□□□ -0.1
CDH11P55287 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms