Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGCS2P54868 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC17.92■□□□□ 0.46
HMGCS2P54868 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
HMGCS2P54868 LRRC59-203ENST00000576448 1531 ntBASIC17.92■□□□□ 0.46
HMGCS2P54868 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
HMGCS2P54868 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGCS2P54868 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
HMGCS2P54868 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCS2P54868 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.91■□□□□ 0.46
HMGCS2P54868 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCS2P54868 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCS2P54868 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCS2P54868 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCS2P54868 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCS2P54868 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCS2P54868 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
HMGCS2P54868 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC17.91■□□□□ 0.46
HMGCS2P54868 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
HMGCS2P54868 NUS1P3-201ENST00000423502 862 ntBASIC17.91■□□□□ 0.46
HMGCS2P54868 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC17.91■□□□□ 0.46
HMGCS2P54868 AC004898.1-201ENST00000451057 766 ntBASIC17.91■□□□□ 0.46
HMGCS2P54868 AKR7A2P1-201ENST00000460134 915 ntBASIC17.91■□□□□ 0.46
HMGCS2P54868 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC17.91■□□□□ 0.46
HMGCS2P54868 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC17.91■□□□□ 0.46
HMGCS2P54868 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC17.91■□□□□ 0.46
HMGCS2P54868 RHOQP1-201ENST00000555758 579 ntBASIC17.91■□□□□ 0.46
HMGCS2P54868 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
HMGCS2P54868 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
HMGCS2P54868 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
HMGCS2P54868 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCS2P54868 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
HMGCS2P54868 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC17.91■□□□□ 0.46
HMGCS2P54868 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC17.91■□□□□ 0.46
HMGCS2P54868 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC17.91■□□□□ 0.46
HMGCS2P54868 PRSS30P-206ENST00000641773 873 ntBASIC17.91■□□□□ 0.46
HMGCS2P54868 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCS2P54868 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC17.91■□□□□ 0.46
HMGCS2P54868 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
HMGCS2P54868 AC018735.1-201ENST00000437208 1502 ntBASIC17.91■□□□□ 0.46
HMGCS2P54868 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCS2P54868 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.91■□□□□ 0.46
HMGCS2P54868 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCS2P54868 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC17.91■□□□□ 0.46
HMGCS2P54868 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCS2P54868 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCS2P54868 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCS2P54868 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCS2P54868 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCS2P54868 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
HMGCS2P54868 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
HMGCS2P54868 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.91■□□□□ 0.46
HMGCS2P54868 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.9■□□□□ 0.46
HMGCS2P54868 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMGCS2P54868 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMGCS2P54868 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMGCS2P54868 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.9■□□□□ 0.46
HMGCS2P54868 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
HMGCS2P54868 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMGCS2P54868 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HMGCS2P54868 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC17.9■□□□□ 0.46
HMGCS2P54868 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC17.9■□□□□ 0.46
HMGCS2P54868 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC17.9■□□□□ 0.46
HMGCS2P54868 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HMGCS2P54868 NEU3-202ENST00000526068 431 ntTSL 2 BASIC17.9■□□□□ 0.46
HMGCS2P54868 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
HMGCS2P54868 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HMGCS2P54868 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.9■□□□□ 0.46
HMGCS2P54868 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.9■□□□□ 0.46
HMGCS2P54868 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMGCS2P54868 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HMGCS2P54868 LINC02447-202ENST00000501888 2146 ntBASIC17.9■□□□□ 0.46
HMGCS2P54868 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMGCS2P54868 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
HMGCS2P54868 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HMGCS2P54868 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HMGCS2P54868 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMGCS2P54868 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HMGCS2P54868 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
HMGCS2P54868 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
HMGCS2P54868 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC17.9■□□□□ 0.46
HMGCS2P54868 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
HMGCS2P54868 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.89■□□□□ 0.46
HMGCS2P54868 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
HMGCS2P54868 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HMGCS2P54868 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HMGCS2P54868 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
HMGCS2P54868 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HMGCS2P54868 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
HMGCS2P54868 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.89■□□□□ 0.45
HMGCS2P54868 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HMGCS2P54868 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HMGCS2P54868 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
HMGCS2P54868 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.89■□□□□ 0.45
HMGCS2P54868 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
HMGCS2P54868 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
HMGCS2P54868 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HMGCS2P54868 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
HMGCS2P54868 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
HMGCS2P54868 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.89■□□□□ 0.45
HMGCS2P54868 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms