Protein–RNA interactions for Protein: P52951

GBX2, Homeobox protein GBX-2, humanhuman

Predicted RBP Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GBX2P52951 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
GBX2P52951 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
GBX2P52951 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.05□□□□□ -0.16
GBX2P52951 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
GBX2P52951 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC14.05□□□□□ -0.16
GBX2P52951 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
GBX2P52951 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
GBX2P52951 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GBX2P52951 RHOQP3-201ENST00000437982 621 ntBASIC14.05□□□□□ -0.16
GBX2P52951 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
GBX2P52951 UNC93B6-202ENST00000528242 690 ntBASIC14.05□□□□□ -0.16
GBX2P52951 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC14.05□□□□□ -0.16
GBX2P52951 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.05□□□□□ -0.16
GBX2P52951 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.05□□□□□ -0.16
GBX2P52951 AL161645.1-201ENST00000622716 1255 ntBASIC14.05□□□□□ -0.16
GBX2P52951 FAM215A-202ENST00000632077 792 ntBASIC14.05□□□□□ -0.16
GBX2P52951 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GBX2P52951 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GBX2P52951 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
GBX2P52951 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GBX2P52951 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GBX2P52951 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.05□□□□□ -0.16
GBX2P52951 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
GBX2P52951 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GBX2P52951 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC14.05□□□□□ -0.16
GBX2P52951 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GBX2P52951 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC14.05□□□□□ -0.16
GBX2P52951 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
GBX2P52951 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
GBX2P52951 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.05□□□□□ -0.16
GBX2P52951 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GBX2P52951 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
GBX2P52951 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.05□□□□□ -0.16
GBX2P52951 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
GBX2P52951 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GBX2P52951 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
GBX2P52951 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GBX2P52951 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
GBX2P52951 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC14.05□□□□□ -0.16
GBX2P52951 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.05□□□□□ -0.16
GBX2P52951 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
GBX2P52951 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
GBX2P52951 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
GBX2P52951 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
GBX2P52951 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GBX2P52951 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
GBX2P52951 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GBX2P52951 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.04□□□□□ -0.16
GBX2P52951 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
GBX2P52951 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
GBX2P52951 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.04□□□□□ -0.16
GBX2P52951 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GBX2P52951 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GBX2P52951 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GBX2P52951 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
GBX2P52951 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
GBX2P52951 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
GBX2P52951 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GBX2P52951 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GBX2P52951 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC14.04□□□□□ -0.16
GBX2P52951 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.04□□□□□ -0.16
GBX2P52951 HCG4B-203ENST00000450128 991 ntBASIC14.04□□□□□ -0.16
GBX2P52951 AC098859.1-201ENST00000502915 1238 ntBASIC14.04□□□□□ -0.16
GBX2P52951 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.04□□□□□ -0.16
GBX2P52951 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC14.04□□□□□ -0.16
GBX2P52951 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
GBX2P52951 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.04□□□□□ -0.16
GBX2P52951 AL121912.1-201ENST00000603683 238 ntBASIC14.04□□□□□ -0.16
GBX2P52951 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
GBX2P52951 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC14.04□□□□□ -0.16
GBX2P52951 AC010507.1-201ENST00000633895 436 ntBASIC14.04□□□□□ -0.16
GBX2P52951 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GBX2P52951 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
GBX2P52951 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
GBX2P52951 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
GBX2P52951 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.04□□□□□ -0.16
GBX2P52951 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
GBX2P52951 ST20-AS1-201ENST00000560255 4223 ntBASIC14.04□□□□□ -0.16
GBX2P52951 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GBX2P52951 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
GBX2P52951 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
GBX2P52951 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
GBX2P52951 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
GBX2P52951 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GBX2P52951 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
GBX2P52951 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GBX2P52951 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GBX2P52951 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GBX2P52951 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GBX2P52951 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GBX2P52951 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
GBX2P52951 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GBX2P52951 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GBX2P52951 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GBX2P52951 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.04□□□□□ -0.16
GBX2P52951 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
GBX2P52951 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
GBX2P52951 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GBX2P52951 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
GBX2P52951 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms