Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDK7P50613 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDK7P50613 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
CDK7P50613 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC17.24■□□□□ 0.35
CDK7P50613 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDK7P50613 AL138799.1-201ENST00000448213 1675 ntBASIC17.24■□□□□ 0.35
CDK7P50613 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDK7P50613 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDK7P50613 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.24■□□□□ 0.35
CDK7P50613 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDK7P50613 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDK7P50613 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDK7P50613 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
CDK7P50613 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CDK7P50613 KRTAP10-13P-201ENST00000412914 571 ntBASIC17.24■□□□□ 0.35
CDK7P50613 MTX1P1-201ENST00000440904 838 ntBASIC17.24■□□□□ 0.35
CDK7P50613 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC17.24■□□□□ 0.35
CDK7P50613 REEP1-202ENST00000453231 940 ntTSL 2 BASIC17.24■□□□□ 0.35
CDK7P50613 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDK7P50613 ADM-202ENST00000524948 584 ntTSL 2 BASIC17.24■□□□□ 0.35
CDK7P50613 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC17.24■□□□□ 0.35
CDK7P50613 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
CDK7P50613 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC17.24■□□□□ 0.35
CDK7P50613 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC17.24■□□□□ 0.35
CDK7P50613 EEF1DP1-201ENST00000585891 896 ntBASIC17.24■□□□□ 0.35
CDK7P50613 AC016629.1-201ENST00000596579 586 ntBASIC17.24■□□□□ 0.35
CDK7P50613 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC17.24■□□□□ 0.35
CDK7P50613 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CDK7P50613 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDK7P50613 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.24■□□□□ 0.35
CDK7P50613 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDK7P50613 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDK7P50613 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDK7P50613 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC17.24■□□□□ 0.35
CDK7P50613 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC17.24■□□□□ 0.35
CDK7P50613 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDK7P50613 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CDK7P50613 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDK7P50613 KRT8P35-201ENST00000483942 1338 ntBASIC17.23■□□□□ 0.35
CDK7P50613 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.23■□□□□ 0.35
CDK7P50613 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
CDK7P50613 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDK7P50613 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
CDK7P50613 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.23■□□□□ 0.35
CDK7P50613 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDK7P50613 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDK7P50613 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
CDK7P50613 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
CDK7P50613 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDK7P50613 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDK7P50613 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC17.23■□□□□ 0.35
CDK7P50613 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDK7P50613 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC17.23■□□□□ 0.35
CDK7P50613 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDK7P50613 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC17.23■□□□□ 0.35
CDK7P50613 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC17.23■□□□□ 0.35
CDK7P50613 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CDK7P50613 CYGB-203ENST00000589145 788 ntTSL 3 BASIC17.23■□□□□ 0.35
CDK7P50613 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDK7P50613 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDK7P50613 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
CDK7P50613 AL096828.3-201ENST00000615354 462 ntBASIC17.23■□□□□ 0.35
CDK7P50613 AC015967.2-201ENST00000624092 234 ntBASIC17.23■□□□□ 0.35
CDK7P50613 AC006435.4-201ENST00000625037 234 ntBASIC17.23■□□□□ 0.35
CDK7P50613 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC17.23■□□□□ 0.35
CDK7P50613 AL356737.1-201ENST00000634391 234 ntBASIC17.23■□□□□ 0.35
CDK7P50613 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC17.23■□□□□ 0.35
CDK7P50613 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC17.23■□□□□ 0.35
CDK7P50613 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.23■□□□□ 0.35
CDK7P50613 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDK7P50613 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDK7P50613 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.23■□□□□ 0.35
CDK7P50613 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CDK7P50613 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC17.23■□□□□ 0.35
CDK7P50613 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDK7P50613 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CDK7P50613 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CDK7P50613 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDK7P50613 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
CDK7P50613 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDK7P50613 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDK7P50613 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.22■□□□□ 0.35
CDK7P50613 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDK7P50613 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDK7P50613 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDK7P50613 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDK7P50613 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.22■□□□□ 0.35
CDK7P50613 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDK7P50613 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDK7P50613 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDK7P50613 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDK7P50613 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDK7P50613 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CDK7P50613 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDK7P50613 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDK7P50613 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CDK7P50613 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CDK7P50613 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
CDK7P50613 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC17.22■□□□□ 0.35
CDK7P50613 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms