Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
LHX2P50458 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
LHX2P50458 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LHX2P50458 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LHX2P50458 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
LHX2P50458 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
LHX2P50458 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LHX2P50458 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LHX2P50458 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LHX2P50458 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LHX2P50458 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.93□□□□□ -0.18
LHX2P50458 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LHX2P50458 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LHX2P50458 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LHX2P50458 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC13.93□□□□□ -0.18
LHX2P50458 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LHX2P50458 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LHX2P50458 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LHX2P50458 AC009090.5-201ENST00000624886 2285 ntBASIC13.93□□□□□ -0.18
LHX2P50458 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
LHX2P50458 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
LHX2P50458 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
LHX2P50458 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LHX2P50458 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LHX2P50458 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LHX2P50458 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
LHX2P50458 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LHX2P50458 GPR53P-205ENST00000457298 1084 ntBASIC13.93□□□□□ -0.18
LHX2P50458 USP32P1-208ENST00000506594 1164 ntBASIC13.93□□□□□ -0.18
LHX2P50458 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
LHX2P50458 TDH-203ENST00000531764 1110 ntBASIC13.93□□□□□ -0.18
LHX2P50458 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC13.93□□□□□ -0.18
LHX2P50458 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LHX2P50458 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
LHX2P50458 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.93□□□□□ -0.18
LHX2P50458 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.93□□□□□ -0.18
LHX2P50458 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LHX2P50458 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.93□□□□□ -0.18
LHX2P50458 APOC4-201ENST00000591600 348 ntTSL 3 BASIC13.93□□□□□ -0.18
LHX2P50458 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LHX2P50458 AC005252.2-201ENST00000624630 1141 ntBASIC13.93□□□□□ -0.18
LHX2P50458 AC022188.1-201ENST00000620960 1664 ntBASIC13.93□□□□□ -0.18
LHX2P50458 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
LHX2P50458 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LHX2P50458 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
LHX2P50458 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LHX2P50458 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LHX2P50458 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LHX2P50458 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
LHX2P50458 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.93□□□□□ -0.18
LHX2P50458 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
LHX2P50458 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
LHX2P50458 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LHX2P50458 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
LHX2P50458 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.93□□□□□ -0.18
LHX2P50458 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LHX2P50458 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LHX2P50458 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LHX2P50458 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LHX2P50458 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LHX2P50458 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.93□□□□□ -0.18
LHX2P50458 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
LHX2P50458 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LHX2P50458 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
LHX2P50458 AC105250.1-201ENST00000509378 2057 ntBASIC13.92□□□□□ -0.18
LHX2P50458 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
LHX2P50458 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LHX2P50458 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LHX2P50458 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LHX2P50458 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC13.92□□□□□ -0.18
LHX2P50458 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
LHX2P50458 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LHX2P50458 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LHX2P50458 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC13.92□□□□□ -0.18
LHX2P50458 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
LHX2P50458 AC079776.1-201ENST00000401540 1152 ntBASIC13.92□□□□□ -0.18
LHX2P50458 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC13.92□□□□□ -0.18
LHX2P50458 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LHX2P50458 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
LHX2P50458 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC13.92□□□□□ -0.18
LHX2P50458 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC13.92□□□□□ -0.18
LHX2P50458 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
LHX2P50458 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC13.92□□□□□ -0.18
LHX2P50458 KRT17P8-201ENST00000540749 863 ntBASIC13.92□□□□□ -0.18
LHX2P50458 AP001063.1-201ENST00000568332 529 ntBASIC13.92□□□□□ -0.18
LHX2P50458 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
LHX2P50458 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.92□□□□□ -0.18
LHX2P50458 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.92□□□□□ -0.18
LHX2P50458 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LHX2P50458 ANKRD26P3-201ENST00000454044 2748 ntBASIC13.92□□□□□ -0.18
LHX2P50458 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LHX2P50458 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LHX2P50458 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LHX2P50458 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LHX2P50458 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
LHX2P50458 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
LHX2P50458 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.92□□□□□ -0.18
LHX2P50458 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LHX2P50458 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.92□□□□□ -0.18
LHX2P50458 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms