Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC13.74□□□□□ -0.21
GDNFP39905 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GDNFP39905 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
GDNFP39905 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GDNFP39905 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC13.74□□□□□ -0.21
GDNFP39905 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GDNFP39905 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.74□□□□□ -0.21
GDNFP39905 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GDNFP39905 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.74□□□□□ -0.21
GDNFP39905 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
GDNFP39905 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.74□□□□□ -0.21
GDNFP39905 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GDNFP39905 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GDNFP39905 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GDNFP39905 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GDNFP39905 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GDNFP39905 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
GDNFP39905 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
GDNFP39905 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
GDNFP39905 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
GDNFP39905 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GDNFP39905 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
GDNFP39905 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GDNFP39905 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GDNFP39905 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
GDNFP39905 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
GDNFP39905 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.73□□□□□ -0.21
GDNFP39905 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
GDNFP39905 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.73□□□□□ -0.21
GDNFP39905 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
GDNFP39905 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GDNFP39905 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC13.73□□□□□ -0.21
GDNFP39905 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
GDNFP39905 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
GDNFP39905 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC13.73□□□□□ -0.21
GDNFP39905 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC13.73□□□□□ -0.21
GDNFP39905 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC13.73□□□□□ -0.21
GDNFP39905 MIR4515-201ENST00000584082 81 ntBASIC13.73□□□□□ -0.21
GDNFP39905 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC13.73□□□□□ -0.21
GDNFP39905 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
GDNFP39905 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
GDNFP39905 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
GDNFP39905 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
GDNFP39905 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
GDNFP39905 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
GDNFP39905 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
GDNFP39905 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
GDNFP39905 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
GDNFP39905 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GDNFP39905 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.73□□□□□ -0.21
GDNFP39905 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
GDNFP39905 AC148477.4-201ENST00000613430 1793 ntBASIC13.73□□□□□ -0.21
GDNFP39905 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GDNFP39905 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GDNFP39905 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
GDNFP39905 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.73□□□□□ -0.21
GDNFP39905 AC140479.7-201ENST00000636301 2332 ntBASIC13.73□□□□□ -0.21
GDNFP39905 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
GDNFP39905 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC13.73□□□□□ -0.21
GDNFP39905 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
GDNFP39905 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
GDNFP39905 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.72□□□□□ -0.21
GDNFP39905 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GDNFP39905 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.72□□□□□ -0.21
GDNFP39905 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
GDNFP39905 CICP14-201ENST00000629111 2732 ntBASIC13.72□□□□□ -0.21
GDNFP39905 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GDNFP39905 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.72□□□□□ -0.21
GDNFP39905 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
GDNFP39905 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GDNFP39905 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
GDNFP39905 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GDNFP39905 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC13.72□□□□□ -0.21
GDNFP39905 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
GDNFP39905 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
GDNFP39905 RHOQP3-201ENST00000437982 621 ntBASIC13.72□□□□□ -0.21
GDNFP39905 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC13.72□□□□□ -0.21
GDNFP39905 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC13.72□□□□□ -0.21
GDNFP39905 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC13.72□□□□□ -0.21
GDNFP39905 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC13.72□□□□□ -0.21
GDNFP39905 AC096734.2-201ENST00000562054 433 ntBASIC13.72□□□□□ -0.21
GDNFP39905 AC106730.1-201ENST00000566722 1090 ntBASIC13.72□□□□□ -0.21
GDNFP39905 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC13.72□□□□□ -0.21
GDNFP39905 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
GDNFP39905 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC13.72□□□□□ -0.21
GDNFP39905 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC13.72□□□□□ -0.21
GDNFP39905 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
GDNFP39905 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.72□□□□□ -0.21
GDNFP39905 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
GDNFP39905 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC13.72□□□□□ -0.21
GDNFP39905 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
GDNFP39905 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.72□□□□□ -0.21
GDNFP39905 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.72□□□□□ -0.21
GDNFP39905 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.72□□□□□ -0.21
GDNFP39905 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
GDNFP39905 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC13.72□□□□□ -0.21
GDNFP39905 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GDNFP39905 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
GDNFP39905 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
GDNFP39905 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms