Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 AC005740.2-201ENST00000511085 419 ntBASIC19.46■□□□□ 0.71
RFC4P35249 FADS2-212ENST00000522639 360 ntTSL 5 BASIC19.46■□□□□ 0.71
RFC4P35249 FADS2-215ENST00000574708 385 ntTSL 3 BASIC19.46■□□□□ 0.71
RFC4P35249 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC19.46■□□□□ 0.71
RFC4P35249 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
RFC4P35249 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC19.46■□□□□ 0.71
RFC4P35249 AL353726.2-201ENST00000623259 884 ntBASIC19.46■□□□□ 0.71
RFC4P35249 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC19.46■□□□□ 0.71
RFC4P35249 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RFC4P35249 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFC4P35249 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RFC4P35249 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RFC4P35249 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFC4P35249 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFC4P35249 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RFC4P35249 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RFC4P35249 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC19.46■□□□□ 0.71
RFC4P35249 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.46■□□□□ 0.71
RFC4P35249 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RFC4P35249 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFC4P35249 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC19.45■□□□□ 0.7
RFC4P35249 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RFC4P35249 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
RFC4P35249 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFC4P35249 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFC4P35249 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC19.45■□□□□ 0.7
RFC4P35249 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFC4P35249 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC19.45■□□□□ 0.7
RFC4P35249 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
RFC4P35249 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RFC4P35249 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RFC4P35249 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFC4P35249 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC19.45■□□□□ 0.7
RFC4P35249 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC19.45■□□□□ 0.7
RFC4P35249 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
RFC4P35249 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC19.45■□□□□ 0.7
RFC4P35249 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
RFC4P35249 AL645937.2-201ENST00000396808 931 ntBASIC19.45■□□□□ 0.7
RFC4P35249 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC19.45■□□□□ 0.7
RFC4P35249 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFC4P35249 RGS5-214ENST00000429865 754 ntTSL 3 BASIC19.45■□□□□ 0.7
RFC4P35249 FTLP1-201ENST00000449155 526 ntBASIC19.45■□□□□ 0.7
RFC4P35249 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RFC4P35249 SUPT4H1P2-201ENST00000501248 353 ntBASIC19.45■□□□□ 0.7
RFC4P35249 AC004066.1-201ENST00000502488 802 ntBASIC19.45■□□□□ 0.7
RFC4P35249 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFC4P35249 MIR3907-201ENST00000579424 151 ntBASIC19.45■□□□□ 0.7
RFC4P35249 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC19.45■□□□□ 0.7
RFC4P35249 AP001002.3-201ENST00000623482 206 ntBASIC19.45■□□□□ 0.7
RFC4P35249 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFC4P35249 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFC4P35249 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RFC4P35249 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RFC4P35249 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC19.45■□□□□ 0.7
RFC4P35249 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RFC4P35249 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFC4P35249 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
RFC4P35249 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC19.45■□□□□ 0.7
RFC4P35249 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFC4P35249 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RFC4P35249 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RFC4P35249 AC007787.1-201ENST00000588095 1583 ntBASIC19.44■□□□□ 0.7
RFC4P35249 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RFC4P35249 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFC4P35249 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC19.44■□□□□ 0.7
RFC4P35249 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RFC4P35249 KRT8P14-201ENST00000414254 1442 ntBASIC19.44■□□□□ 0.7
RFC4P35249 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFC4P35249 FLJ38576-201ENST00000623820 2459 ntBASIC19.44■□□□□ 0.7
RFC4P35249 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RFC4P35249 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RFC4P35249 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC19.44■□□□□ 0.7
RFC4P35249 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC19.44■□□□□ 0.7
RFC4P35249 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
RFC4P35249 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RFC4P35249 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC19.44■□□□□ 0.7
RFC4P35249 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC19.44■□□□□ 0.7
RFC4P35249 PFN2-205ENST00000461868 613 ntTSL 2 BASIC19.44■□□□□ 0.7
RFC4P35249 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC19.44■□□□□ 0.7
RFC4P35249 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC19.44■□□□□ 0.7
RFC4P35249 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC19.44■□□□□ 0.7
RFC4P35249 MIR7845-201ENST00000618396 99 ntBASIC19.44■□□□□ 0.7
RFC4P35249 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC19.44■□□□□ 0.7
RFC4P35249 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFC4P35249 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFC4P35249 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RFC4P35249 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC19.44■□□□□ 0.7
RFC4P35249 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RFC4P35249 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
RFC4P35249 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
RFC4P35249 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RFC4P35249 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RFC4P35249 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
RFC4P35249 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
RFC4P35249 AL158070.2-201ENST00000623713 1621 ntBASIC19.43■□□□□ 0.7
RFC4P35249 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RFC4P35249 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC19.43■□□□□ 0.7
RFC4P35249 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC19.43■□□□□ 0.7
RFC4P35249 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC19.43■□□□□ 0.7
RFC4P35249 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms