Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RPA3P35244 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.91■□□□□ 0.14
RPA3P35244 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
RPA3P35244 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
RPA3P35244 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
RPA3P35244 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
RPA3P35244 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
RPA3P35244 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.91■□□□□ 0.14
RPA3P35244 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RPA3P35244 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RPA3P35244 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
RPA3P35244 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RPA3P35244 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RPA3P35244 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RPA3P35244 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.9■□□□□ 0.14
RPA3P35244 AC068587.6-202ENST00000641839 5619 ntBASIC15.9■□□□□ 0.14
RPA3P35244 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
RPA3P35244 CICP4-201ENST00000447359 2812 ntBASIC15.9■□□□□ 0.14
RPA3P35244 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RPA3P35244 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RPA3P35244 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RPA3P35244 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.9■□□□□ 0.14
RPA3P35244 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
RPA3P35244 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.9■□□□□ 0.14
RPA3P35244 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.9■□□□□ 0.14
RPA3P35244 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.9■□□□□ 0.14
RPA3P35244 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC15.9■□□□□ 0.14
RPA3P35244 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.9■□□□□ 0.14
RPA3P35244 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC15.9■□□□□ 0.14
RPA3P35244 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC15.9■□□□□ 0.14
RPA3P35244 AC243562.1-201ENST00000560672 389 ntBASIC15.9■□□□□ 0.14
RPA3P35244 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.9■□□□□ 0.14
RPA3P35244 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.9■□□□□ 0.14
RPA3P35244 AC027307.2-201ENST00000591252 911 ntBASIC15.9■□□□□ 0.14
RPA3P35244 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.9■□□□□ 0.14
RPA3P35244 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RPA3P35244 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
RPA3P35244 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RPA3P35244 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
RPA3P35244 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
RPA3P35244 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RPA3P35244 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RPA3P35244 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
RPA3P35244 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC15.9■□□□□ 0.14
RPA3P35244 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RPA3P35244 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RPA3P35244 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
RPA3P35244 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.9■□□□□ 0.14
RPA3P35244 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC15.9■□□□□ 0.14
RPA3P35244 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RPA3P35244 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
RPA3P35244 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.89■□□□□ 0.14
RPA3P35244 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
RPA3P35244 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC15.89■□□□□ 0.13
RPA3P35244 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
RPA3P35244 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RPA3P35244 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RPA3P35244 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RPA3P35244 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RPA3P35244 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RPA3P35244 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
RPA3P35244 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC15.89■□□□□ 0.13
RPA3P35244 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RPA3P35244 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RPA3P35244 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RPA3P35244 AL592309.1-201ENST00000443127 649 ntBASIC15.89■□□□□ 0.13
RPA3P35244 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RPA3P35244 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC15.89■□□□□ 0.13
RPA3P35244 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC15.89■□□□□ 0.13
RPA3P35244 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.89■□□□□ 0.13
RPA3P35244 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC15.89■□□□□ 0.13
RPA3P35244 RNF34-208ENST00000555076 593 ntTSL 3 BASIC15.89■□□□□ 0.13
RPA3P35244 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.89■□□□□ 0.13
RPA3P35244 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.89■□□□□ 0.13
RPA3P35244 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.89■□□□□ 0.13
RPA3P35244 AC008267.7-201ENST00000624570 1194 ntBASIC15.89■□□□□ 0.13
RPA3P35244 AC105339.1-204ENST00000636249 355 ntBASIC15.89■□□□□ 0.13
RPA3P35244 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RPA3P35244 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RPA3P35244 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.89■□□□□ 0.13
RPA3P35244 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RPA3P35244 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.89■□□□□ 0.13
RPA3P35244 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC15.89■□□□□ 0.13
RPA3P35244 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC15.89■□□□□ 0.13
RPA3P35244 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RPA3P35244 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.89■□□□□ 0.13
RPA3P35244 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
RPA3P35244 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC15.89■□□□□ 0.13
RPA3P35244 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RPA3P35244 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RPA3P35244 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RPA3P35244 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RPA3P35244 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
RPA3P35244 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
RPA3P35244 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
RPA3P35244 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.89■□□□□ 0.13
RPA3P35244 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC15.89■□□□□ 0.13
RPA3P35244 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
RPA3P35244 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
RPA3P35244 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms