Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TNFRSF1BP20333 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TNFRSF1BP20333 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TNFRSF1BP20333 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TNFRSF1BP20333 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TNFRSF1BP20333 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TNFRSF1BP20333 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TNFRSF1BP20333 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
TNFRSF1BP20333 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TNFRSF1BP20333 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TNFRSF1BP20333 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
TNFRSF1BP20333 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
TNFRSF1BP20333 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFRSF1BP20333 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
TNFRSF1BP20333 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFRSF1BP20333 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFRSF1BP20333 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFRSF1BP20333 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFRSF1BP20333 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC14.61□□□□□ -0.07
TNFRSF1BP20333 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TNFRSF1BP20333 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TNFRSF1BP20333 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
TNFRSF1BP20333 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.61□□□□□ -0.07
TNFRSF1BP20333 AL607033.1-201ENST00000623900 1599 ntBASIC14.61□□□□□ -0.07
TNFRSF1BP20333 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.61□□□□□ -0.07
TNFRSF1BP20333 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFRSF1BP20333 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TNFRSF1BP20333 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFRSF1BP20333 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFRSF1BP20333 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TNFRSF1BP20333 MIR346-201ENST00000362234 95 ntBASIC14.61□□□□□ -0.07
TNFRSF1BP20333 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFRSF1BP20333 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFRSF1BP20333 HLA-H-201ENST00000383620 1096 ntBASIC14.61□□□□□ -0.07
TNFRSF1BP20333 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.61□□□□□ -0.07
TNFRSF1BP20333 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.61□□□□□ -0.07
TNFRSF1BP20333 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC14.61□□□□□ -0.07
TNFRSF1BP20333 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.61□□□□□ -0.07
TNFRSF1BP20333 AC079140.1-201ENST00000508039 487 ntBASIC14.61□□□□□ -0.07
TNFRSF1BP20333 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
TNFRSF1BP20333 LINC01225-203ENST00000563550 1244 ntBASIC14.61□□□□□ -0.07
TNFRSF1BP20333 AC106730.1-201ENST00000566722 1090 ntBASIC14.61□□□□□ -0.07
TNFRSF1BP20333 AL121894.2-201ENST00000602977 491 ntBASIC14.61□□□□□ -0.07
TNFRSF1BP20333 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.61□□□□□ -0.07
TNFRSF1BP20333 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFRSF1BP20333 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.61□□□□□ -0.07
TNFRSF1BP20333 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFRSF1BP20333 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFRSF1BP20333 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
TNFRSF1BP20333 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.61□□□□□ -0.07
TNFRSF1BP20333 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
TNFRSF1BP20333 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
TNFRSF1BP20333 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFRSF1BP20333 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
TNFRSF1BP20333 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFRSF1BP20333 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC14.61□□□□□ -0.07
TNFRSF1BP20333 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFRSF1BP20333 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFRSF1BP20333 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFRSF1BP20333 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.61□□□□□ -0.07
TNFRSF1BP20333 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
TNFRSF1BP20333 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TNFRSF1BP20333 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
TNFRSF1BP20333 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.6□□□□□ -0.07
TNFRSF1BP20333 FGD5P1-202ENST00000614866 2498 ntBASIC14.6□□□□□ -0.07
TNFRSF1BP20333 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TNFRSF1BP20333 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TNFRSF1BP20333 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.6□□□□□ -0.07
TNFRSF1BP20333 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TNFRSF1BP20333 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.6□□□□□ -0.07
TNFRSF1BP20333 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.6□□□□□ -0.07
TNFRSF1BP20333 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
TNFRSF1BP20333 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TNFRSF1BP20333 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TNFRSF1BP20333 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
TNFRSF1BP20333 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
TNFRSF1BP20333 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TNFRSF1BP20333 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
TNFRSF1BP20333 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TNFRSF1BP20333 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TNFRSF1BP20333 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TNFRSF1BP20333 AZGP1P1-201ENST00000411909 902 ntBASIC14.6□□□□□ -0.07
TNFRSF1BP20333 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TNFRSF1BP20333 SPDYE11-202ENST00000450699 704 ntBASIC14.6□□□□□ -0.07
TNFRSF1BP20333 TIMM8BP1-201ENST00000452384 211 ntBASIC14.6□□□□□ -0.07
TNFRSF1BP20333 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC14.6□□□□□ -0.07
TNFRSF1BP20333 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TNFRSF1BP20333 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.6□□□□□ -0.07
TNFRSF1BP20333 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TNFRSF1BP20333 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.6□□□□□ -0.07
TNFRSF1BP20333 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
TNFRSF1BP20333 SPDYE9P-201ENST00000570642 692 ntBASIC14.6□□□□□ -0.07
TNFRSF1BP20333 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.6□□□□□ -0.07
TNFRSF1BP20333 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC14.6□□□□□ -0.07
TNFRSF1BP20333 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC14.6□□□□□ -0.07
TNFRSF1BP20333 SPDYE10P-202ENST00000612005 668 ntBASIC14.6□□□□□ -0.07
TNFRSF1BP20333 SPDYE8P-202ENST00000612377 668 ntBASIC14.6□□□□□ -0.07
TNFRSF1BP20333 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
TNFRSF1BP20333 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
TNFRSF1BP20333 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms