Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC15.69■□□□□ 0.1
XRCC1P18887 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.69■□□□□ 0.1
XRCC1P18887 AL033527.5-202ENST00000641632 1098 ntBASIC15.69■□□□□ 0.1
XRCC1P18887 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
XRCC1P18887 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC15.69■□□□□ 0.1
XRCC1P18887 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC15.69■□□□□ 0.1
XRCC1P18887 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC15.69■□□□□ 0.1
XRCC1P18887 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
XRCC1P18887 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
XRCC1P18887 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
XRCC1P18887 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC15.69■□□□□ 0.1
XRCC1P18887 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
XRCC1P18887 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.69■□□□□ 0.1
XRCC1P18887 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
XRCC1P18887 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
XRCC1P18887 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
XRCC1P18887 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
XRCC1P18887 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
XRCC1P18887 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
XRCC1P18887 IMPDH1P4-201ENST00000445028 1534 ntBASIC15.68■□□□□ 0.1
XRCC1P18887 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
XRCC1P18887 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
XRCC1P18887 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.68■□□□□ 0.1
XRCC1P18887 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
XRCC1P18887 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC15.68■□□□□ 0.1
XRCC1P18887 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.68■□□□□ 0.1
XRCC1P18887 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC15.68■□□□□ 0.1
XRCC1P18887 AC023908.3-201ENST00000564211 3047 ntBASIC15.68■□□□□ 0.1
XRCC1P18887 AC106881.1-201ENST00000605849 3329 ntBASIC15.68■□□□□ 0.1
XRCC1P18887 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
XRCC1P18887 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
XRCC1P18887 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
XRCC1P18887 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
XRCC1P18887 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.68■□□□□ 0.1
XRCC1P18887 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.68■□□□□ 0.1
XRCC1P18887 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
XRCC1P18887 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.68■□□□□ 0.1
XRCC1P18887 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.68■□□□□ 0.1
XRCC1P18887 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
XRCC1P18887 BTBD7P1-201ENST00000447253 1453 ntBASIC15.68■□□□□ 0.1
XRCC1P18887 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
XRCC1P18887 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
XRCC1P18887 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
XRCC1P18887 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
XRCC1P18887 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
XRCC1P18887 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC15.68■□□□□ 0.1
XRCC1P18887 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.68■□□□□ 0.1
XRCC1P18887 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC15.68■□□□□ 0.1
XRCC1P18887 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
XRCC1P18887 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
XRCC1P18887 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.68■□□□□ 0.1
XRCC1P18887 REEP4-207ENST00000523293 913 ntTSL 3 BASIC15.68■□□□□ 0.1
XRCC1P18887 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.68■□□□□ 0.1
XRCC1P18887 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.68■□□□□ 0.1
XRCC1P18887 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.68■□□□□ 0.1
XRCC1P18887 MIR6069-201ENST00000620069 79 ntBASIC15.68■□□□□ 0.1
XRCC1P18887 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
XRCC1P18887 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
XRCC1P18887 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.68■□□□□ 0.1
XRCC1P18887 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.68■□□□□ 0.1
XRCC1P18887 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
XRCC1P18887 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
XRCC1P18887 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
XRCC1P18887 AL136982.4-201ENST00000437689 1740 ntBASIC15.68■□□□□ 0.1
XRCC1P18887 TMBIM7P-203ENST00000641617 1718 ntBASIC15.68■□□□□ 0.1
XRCC1P18887 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.68■□□□□ 0.1
XRCC1P18887 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
XRCC1P18887 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.68■□□□□ 0.1
XRCC1P18887 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
XRCC1P18887 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
XRCC1P18887 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
XRCC1P18887 AL691432.1-201ENST00000596308 1422 ntBASIC15.68■□□□□ 0.1
XRCC1P18887 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC15.68■□□□□ 0.1
XRCC1P18887 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.67■□□□□ 0.1
XRCC1P18887 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
XRCC1P18887 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.67■□□□□ 0.1
XRCC1P18887 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.67■□□□□ 0.1
XRCC1P18887 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
XRCC1P18887 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
XRCC1P18887 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
XRCC1P18887 CYP4F24P-201ENST00000586049 1580 ntBASIC15.67■□□□□ 0.1
XRCC1P18887 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
XRCC1P18887 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.67■□□□□ 0.1
XRCC1P18887 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
XRCC1P18887 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
XRCC1P18887 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
XRCC1P18887 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
XRCC1P18887 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
XRCC1P18887 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
XRCC1P18887 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
XRCC1P18887 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
XRCC1P18887 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
XRCC1P18887 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
XRCC1P18887 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
XRCC1P18887 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
XRCC1P18887 AC004987.2-201ENST00000395959 1148 ntBASIC15.67■□□□□ 0.1
XRCC1P18887 FO393414.2-201ENST00000405153 598 ntBASIC15.67■□□□□ 0.1
XRCC1P18887 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.67■□□□□ 0.1
XRCC1P18887 LHX6-205ENST00000464484 666 ntTSL 2 BASIC15.67■□□□□ 0.1
XRCC1P18887 RN7SL618P-201ENST00000477850 296 ntBASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 59.6 ms