Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CCL3L1P16619 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CCL3L1P16619 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC12.96□□□□□ -0.34
CCL3L1P16619 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
CCL3L1P16619 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC12.96□□□□□ -0.34
CCL3L1P16619 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CCL3L1P16619 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC12.96□□□□□ -0.34
CCL3L1P16619 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
CCL3L1P16619 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CCL3L1P16619 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CCL3L1P16619 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
CCL3L1P16619 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
CCL3L1P16619 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
CCL3L1P16619 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
CCL3L1P16619 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC12.95□□□□□ -0.34
CCL3L1P16619 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CCL3L1P16619 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC12.95□□□□□ -0.34
CCL3L1P16619 TDG-209ENST00000544861 1387 ntTSL 2 BASIC12.95□□□□□ -0.34
CCL3L1P16619 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL3L1P16619 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL3L1P16619 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC12.95□□□□□ -0.34
CCL3L1P16619 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CCL3L1P16619 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CCL3L1P16619 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CCL3L1P16619 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL3L1P16619 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
CCL3L1P16619 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC12.95□□□□□ -0.34
CCL3L1P16619 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CCL3L1P16619 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL3L1P16619 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL3L1P16619 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
CCL3L1P16619 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL3L1P16619 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC12.95□□□□□ -0.34
CCL3L1P16619 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC12.95□□□□□ -0.34
CCL3L1P16619 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL3L1P16619 AP002414.2-201ENST00000591780 3365 ntBASIC12.95□□□□□ -0.34
CCL3L1P16619 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL3L1P16619 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
CCL3L1P16619 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
CCL3L1P16619 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC12.95□□□□□ -0.34
CCL3L1P16619 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL3L1P16619 TSPY16P-201ENST00000449843 468 ntBASIC12.95□□□□□ -0.34
CCL3L1P16619 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC12.95□□□□□ -0.34
CCL3L1P16619 REEP4-207ENST00000523293 913 ntTSL 3 BASIC12.95□□□□□ -0.34
CCL3L1P16619 CMC2-214ENST00000565925 640 ntTSL 5 BASIC12.95□□□□□ -0.34
CCL3L1P16619 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC12.95□□□□□ -0.34
CCL3L1P16619 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
CCL3L1P16619 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC12.95□□□□□ -0.34
CCL3L1P16619 RNA5-8SN1-201ENST00000610460 153 ntBASIC12.95□□□□□ -0.34
CCL3L1P16619 RNA5-8SN5-202ENST00000612463 153 ntBASIC12.95□□□□□ -0.34
CCL3L1P16619 RNA5-8SN4-201ENST00000613359 153 ntBASIC12.95□□□□□ -0.34
CCL3L1P16619 RNA5-8SN5-201ENST00000619471 153 ntBASIC12.95□□□□□ -0.34
CCL3L1P16619 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC12.95□□□□□ -0.34
CCL3L1P16619 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
CCL3L1P16619 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
CCL3L1P16619 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CCL3L1P16619 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL3L1P16619 AC090616.6-203ENST00000579186 1945 ntBASIC12.95□□□□□ -0.34
CCL3L1P16619 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC12.95□□□□□ -0.34
CCL3L1P16619 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL3L1P16619 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC12.95□□□□□ -0.34
CCL3L1P16619 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL3L1P16619 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
CCL3L1P16619 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL3L1P16619 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
CCL3L1P16619 AC020658.6-201ENST00000623564 1870 ntBASIC12.95□□□□□ -0.34
CCL3L1P16619 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
CCL3L1P16619 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CCL3L1P16619 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL3L1P16619 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC12.95□□□□□ -0.34
CCL3L1P16619 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
CCL3L1P16619 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC12.95□□□□□ -0.34
CCL3L1P16619 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC12.95□□□□□ -0.34
CCL3L1P16619 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
CCL3L1P16619 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CCL3L1P16619 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC12.94□□□□□ -0.34
CCL3L1P16619 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CCL3L1P16619 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CCL3L1P16619 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCL3L1P16619 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCL3L1P16619 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC12.94□□□□□ -0.34
CCL3L1P16619 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC12.94□□□□□ -0.34
CCL3L1P16619 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC12.94□□□□□ -0.34
CCL3L1P16619 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CCL3L1P16619 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CCL3L1P16619 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC12.94□□□□□ -0.34
CCL3L1P16619 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCL3L1P16619 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
CCL3L1P16619 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCL3L1P16619 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCL3L1P16619 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCL3L1P16619 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCL3L1P16619 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCL3L1P16619 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCL3L1P16619 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCL3L1P16619 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCL3L1P16619 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CCL3L1P16619 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CCL3L1P16619 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CCL3L1P16619 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms