Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
KRT3P12035 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT3P12035 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT3P12035 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
KRT3P12035 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT3P12035 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT3P12035 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT3P12035 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
KRT3P12035 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
KRT3P12035 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
KRT3P12035 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
KRT3P12035 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
KRT3P12035 TREML5P-201ENST00000421694 576 ntBASIC16.55■□□□□ 0.24
KRT3P12035 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT3P12035 RN7SL618P-201ENST00000477850 296 ntBASIC16.55■□□□□ 0.24
KRT3P12035 AC097493.3-201ENST00000509725 367 ntBASIC16.55■□□□□ 0.24
KRT3P12035 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.55■□□□□ 0.24
KRT3P12035 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
KRT3P12035 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC16.55■□□□□ 0.24
KRT3P12035 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.55■□□□□ 0.24
KRT3P12035 AL158211.3-201ENST00000607385 239 ntBASIC16.55■□□□□ 0.24
KRT3P12035 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.55■□□□□ 0.24
KRT3P12035 GPALPP1-207ENST00000611650 899 ntBASIC16.55■□□□□ 0.24
KRT3P12035 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.55■□□□□ 0.24
KRT3P12035 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC16.55■□□□□ 0.24
KRT3P12035 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT3P12035 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
KRT3P12035 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT3P12035 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT3P12035 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT3P12035 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT3P12035 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
KRT3P12035 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT3P12035 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.55■□□□□ 0.24
KRT3P12035 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT3P12035 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT3P12035 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KRT3P12035 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.55■□□□□ 0.24
KRT3P12035 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC16.54■□□□□ 0.24
KRT3P12035 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT3P12035 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC16.54■□□□□ 0.24
KRT3P12035 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.54■□□□□ 0.24
KRT3P12035 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC16.54■□□□□ 0.24
KRT3P12035 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT3P12035 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT3P12035 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KRT3P12035 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.54■□□□□ 0.24
KRT3P12035 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT3P12035 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.54■□□□□ 0.24
KRT3P12035 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC16.54■□□□□ 0.24
KRT3P12035 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
KRT3P12035 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.54■□□□□ 0.24
KRT3P12035 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KRT3P12035 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT3P12035 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KRT3P12035 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.54■□□□□ 0.24
KRT3P12035 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KRT3P12035 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KRT3P12035 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KRT3P12035 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT3P12035 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT3P12035 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT3P12035 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KRT3P12035 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC16.54■□□□□ 0.24
KRT3P12035 MIR943-201ENST00000401286 94 ntBASIC16.54■□□□□ 0.24
KRT3P12035 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.54■□□□□ 0.24
KRT3P12035 AC074338.1-201ENST00000416825 156 ntBASIC16.54■□□□□ 0.24
KRT3P12035 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.54■□□□□ 0.24
KRT3P12035 AC092580.3-201ENST00000430932 139 ntBASIC16.54■□□□□ 0.24
KRT3P12035 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KRT3P12035 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC16.54■□□□□ 0.24
KRT3P12035 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.54■□□□□ 0.24
KRT3P12035 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.54■□□□□ 0.24
KRT3P12035 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.54■□□□□ 0.24
KRT3P12035 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KRT3P12035 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT3P12035 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC16.54■□□□□ 0.24
KRT3P12035 AC010336.2-201ENST00000564226 506 ntBASIC16.54■□□□□ 0.24
KRT3P12035 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.54■□□□□ 0.24
KRT3P12035 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.54■□□□□ 0.24
KRT3P12035 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KRT3P12035 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KRT3P12035 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.54■□□□□ 0.24
KRT3P12035 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
KRT3P12035 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
KRT3P12035 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
KRT3P12035 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT3P12035 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT3P12035 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.54■□□□□ 0.24
KRT3P12035 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT3P12035 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT3P12035 STK33-217ENST00000534493 1895 ntTSL 2 BASIC16.54■□□□□ 0.24
KRT3P12035 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT3P12035 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT3P12035 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT3P12035 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT3P12035 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.54■□□□□ 0.24
KRT3P12035 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
KRT3P12035 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
KRT3P12035 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms