Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SFTPBP07988 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.73□□□□□ -0.21
SFTPBP07988 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC13.73□□□□□ -0.21
SFTPBP07988 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SFTPBP07988 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SFTPBP07988 DKFZP434H168-201ENST00000567381 1905 ntBASIC13.72□□□□□ -0.21
SFTPBP07988 AC011477.6-201ENST00000604980 1927 ntBASIC13.72□□□□□ -0.21
SFTPBP07988 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SFTPBP07988 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
SFTPBP07988 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SFTPBP07988 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SFTPBP07988 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SFTPBP07988 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SFTPBP07988 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.72□□□□□ -0.21
SFTPBP07988 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SFTPBP07988 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
SFTPBP07988 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
SFTPBP07988 AC023157.3-201ENST00000619086 2088 ntBASIC13.72□□□□□ -0.21
SFTPBP07988 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
SFTPBP07988 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
SFTPBP07988 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.72□□□□□ -0.21
SFTPBP07988 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SFTPBP07988 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SFTPBP07988 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
SFTPBP07988 KRT8P48-201ENST00000515599 1220 ntBASIC13.72□□□□□ -0.21
SFTPBP07988 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC13.72□□□□□ -0.21
SFTPBP07988 AL138918.1-201ENST00000568306 659 ntBASIC13.72□□□□□ -0.21
SFTPBP07988 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SFTPBP07988 AC004835.2-201ENST00000603762 682 ntBASIC13.72□□□□□ -0.21
SFTPBP07988 AC026120.1-201ENST00000611536 926 ntBASIC13.72□□□□□ -0.21
SFTPBP07988 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
SFTPBP07988 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
SFTPBP07988 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
SFTPBP07988 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SFTPBP07988 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC13.72□□□□□ -0.21
SFTPBP07988 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SFTPBP07988 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
SFTPBP07988 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.72□□□□□ -0.21
SFTPBP07988 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SFTPBP07988 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SFTPBP07988 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.72□□□□□ -0.21
SFTPBP07988 AC134407.2-201ENST00000625089 1978 ntBASIC13.72□□□□□ -0.21
SFTPBP07988 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SFTPBP07988 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.72□□□□□ -0.21
SFTPBP07988 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SFTPBP07988 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SFTPBP07988 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.72□□□□□ -0.21
SFTPBP07988 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SFTPBP07988 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SFTPBP07988 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SFTPBP07988 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SFTPBP07988 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SFTPBP07988 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SFTPBP07988 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SFTPBP07988 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
SFTPBP07988 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SFTPBP07988 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
SFTPBP07988 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.71□□□□□ -0.21
SFTPBP07988 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC13.71□□□□□ -0.21
SFTPBP07988 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SFTPBP07988 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SFTPBP07988 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC13.71□□□□□ -0.21
SFTPBP07988 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.71□□□□□ -0.21
SFTPBP07988 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC13.71□□□□□ -0.21
SFTPBP07988 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
SFTPBP07988 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
SFTPBP07988 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SFTPBP07988 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SFTPBP07988 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SFTPBP07988 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
SFTPBP07988 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.71□□□□□ -0.21
SFTPBP07988 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
SFTPBP07988 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
SFTPBP07988 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SFTPBP07988 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SFTPBP07988 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SFTPBP07988 GOLGA2P9-201ENST00000596977 1937 ntBASIC13.71□□□□□ -0.21
SFTPBP07988 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SFTPBP07988 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SFTPBP07988 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
SFTPBP07988 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SFTPBP07988 TFAMP1-201ENST00000412727 736 ntBASIC13.71□□□□□ -0.21
SFTPBP07988 SPDYE11-202ENST00000450699 704 ntBASIC13.71□□□□□ -0.21
SFTPBP07988 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC13.71□□□□□ -0.21
SFTPBP07988 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC13.71□□□□□ -0.21
SFTPBP07988 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC13.71□□□□□ -0.21
SFTPBP07988 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.71□□□□□ -0.21
SFTPBP07988 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.71□□□□□ -0.21
SFTPBP07988 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC13.71□□□□□ -0.21
SFTPBP07988 AL135744.1-201ENST00000565098 629 ntBASIC13.71□□□□□ -0.21
SFTPBP07988 RARRES2P8-201ENST00000566335 367 ntBASIC13.71□□□□□ -0.21
SFTPBP07988 SPDYE9P-201ENST00000570642 692 ntBASIC13.71□□□□□ -0.21
SFTPBP07988 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC13.71□□□□□ -0.21
SFTPBP07988 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SFTPBP07988 SPDYE10P-202ENST00000612005 668 ntBASIC13.71□□□□□ -0.21
SFTPBP07988 SPDYE8P-202ENST00000612377 668 ntBASIC13.71□□□□□ -0.21
SFTPBP07988 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
SFTPBP07988 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.71□□□□□ -0.21
SFTPBP07988 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
SFTPBP07988 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms