Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.88■□□□□ 0.13
HLA-DQB2P05538 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC15.88■□□□□ 0.13
HLA-DQB2P05538 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
HLA-DQB2P05538 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DQB2P05538 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DQB2P05538 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DQB2P05538 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DQB2P05538 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.88■□□□□ 0.13
HLA-DQB2P05538 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DQB2P05538 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.88■□□□□ 0.13
HLA-DQB2P05538 SYS1-203ENST00000414310 795 ntTSL 3 BASIC15.88■□□□□ 0.13
HLA-DQB2P05538 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.88■□□□□ 0.13
HLA-DQB2P05538 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.88■□□□□ 0.13
HLA-DQB2P05538 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.88■□□□□ 0.13
HLA-DQB2P05538 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.88■□□□□ 0.13
HLA-DQB2P05538 KRT18P43-201ENST00000469825 1281 ntBASIC15.88■□□□□ 0.13
HLA-DQB2P05538 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC15.88■□□□□ 0.13
HLA-DQB2P05538 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC15.88■□□□□ 0.13
HLA-DQB2P05538 INO80C-206ENST00000586489 594 ntTSL 3 BASIC15.88■□□□□ 0.13
HLA-DQB2P05538 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.88■□□□□ 0.13
HLA-DQB2P05538 AC138969.3-201ENST00000546612 1459 ntBASIC15.88■□□□□ 0.13
HLA-DQB2P05538 AC138932.2-201ENST00000548268 1459 ntBASIC15.88■□□□□ 0.13
HLA-DQB2P05538 AC126755.4-201ENST00000549796 1459 ntBASIC15.88■□□□□ 0.13
HLA-DQB2P05538 MYB-242ENST00000618728 3545 ntTSL 5 BASIC15.88■□□□□ 0.13
HLA-DQB2P05538 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.88■□□□□ 0.13
HLA-DQB2P05538 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
HLA-DQB2P05538 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC15.88■□□□□ 0.13
HLA-DQB2P05538 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DQB2P05538 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.88■□□□□ 0.13
HLA-DQB2P05538 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DQB2P05538 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DQB2P05538 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DQB2P05538 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HLA-DQB2P05538 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
HLA-DQB2P05538 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DQB2P05538 KRT8P44-201ENST00000441609 1350 ntBASIC15.87■□□□□ 0.13
HLA-DQB2P05538 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DQB2P05538 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DQB2P05538 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DQB2P05538 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.87■□□□□ 0.13
HLA-DQB2P05538 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DQB2P05538 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DQB2P05538 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DQB2P05538 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.87■□□□□ 0.13
HLA-DQB2P05538 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DQB2P05538 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DQB2P05538 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DQB2P05538 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DQB2P05538 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
HLA-DQB2P05538 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DQB2P05538 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.87■□□□□ 0.13
HLA-DQB2P05538 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DQB2P05538 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DQB2P05538 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DQB2P05538 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.87■□□□□ 0.13
HLA-DQB2P05538 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
HLA-DQB2P05538 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DQB2P05538 MEIS3P1-201ENST00000495167 958 ntBASIC15.87■□□□□ 0.13
HLA-DQB2P05538 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
HLA-DQB2P05538 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC15.87■□□□□ 0.13
HLA-DQB2P05538 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DQB2P05538 AL391069.4-201ENST00000609583 481 ntBASIC15.87■□□□□ 0.13
HLA-DQB2P05538 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DQB2P05538 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
HLA-DQB2P05538 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DQB2P05538 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DQB2P05538 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
HLA-DQB2P05538 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DQB2P05538 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.87■□□□□ 0.13
HLA-DQB2P05538 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DQB2P05538 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
HLA-DQB2P05538 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DQB2P05538 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DQB2P05538 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DQB2P05538 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
HLA-DQB2P05538 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.86■□□□□ 0.13
HLA-DQB2P05538 AC006486.2-201ENST00000624246 2199 ntBASIC15.86■□□□□ 0.13
HLA-DQB2P05538 CELP-203ENST00000624767 2414 ntTSL 5 BASIC15.86■□□□□ 0.13
HLA-DQB2P05538 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
HLA-DQB2P05538 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DQB2P05538 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DQB2P05538 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DQB2P05538 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.86■□□□□ 0.13
HLA-DQB2P05538 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
HLA-DQB2P05538 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DQB2P05538 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DQB2P05538 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DQB2P05538 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
HLA-DQB2P05538 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC15.86■□□□□ 0.13
HLA-DQB2P05538 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DQB2P05538 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC15.86■□□□□ 0.13
HLA-DQB2P05538 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC15.86■□□□□ 0.13
HLA-DQB2P05538 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.86■□□□□ 0.13
HLA-DQB2P05538 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.86■□□□□ 0.13
HLA-DQB2P05538 AL355385.1-201ENST00000606123 409 ntBASIC15.86■□□□□ 0.13
HLA-DQB2P05538 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.86■□□□□ 0.13
HLA-DQB2P05538 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.86■□□□□ 0.13
HLA-DQB2P05538 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DQB2P05538 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
HLA-DQB2P05538 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC15.86■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms