Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CD3DP04234 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC13.36□□□□□ -0.27
CD3DP04234 IRF8-202ENST00000562492 946 ntTSL 3 BASIC13.36□□□□□ -0.27
CD3DP04234 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
CD3DP04234 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC13.36□□□□□ -0.27
CD3DP04234 AL078644.1-201ENST00000609881 752 ntBASIC13.36□□□□□ -0.27
CD3DP04234 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
CD3DP04234 AC010327.5-201ENST00000586923 3061 ntBASIC13.36□□□□□ -0.27
CD3DP04234 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CD3DP04234 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC13.36□□□□□ -0.27
CD3DP04234 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CD3DP04234 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CD3DP04234 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CD3DP04234 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CD3DP04234 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CD3DP04234 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CD3DP04234 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CD3DP04234 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
CD3DP04234 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CD3DP04234 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CD3DP04234 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CD3DP04234 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CD3DP04234 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.36□□□□□ -0.27
CD3DP04234 PMS2P7-201ENST00000506558 1336 ntBASIC13.36□□□□□ -0.27
CD3DP04234 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CD3DP04234 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CD3DP04234 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CD3DP04234 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.35□□□□□ -0.27
CD3DP04234 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CD3DP04234 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CD3DP04234 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CD3DP04234 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CD3DP04234 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CD3DP04234 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
CD3DP04234 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CD3DP04234 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC13.35□□□□□ -0.27
CD3DP04234 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CD3DP04234 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CD3DP04234 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
CD3DP04234 OSBPL5-203ENST00000389989 3619 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CD3DP04234 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CD3DP04234 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CD3DP04234 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
CD3DP04234 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CD3DP04234 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CD3DP04234 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.35□□□□□ -0.27
CD3DP04234 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
CD3DP04234 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CD3DP04234 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.35□□□□□ -0.27
CD3DP04234 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
CD3DP04234 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC13.35□□□□□ -0.27
CD3DP04234 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CD3DP04234 AL513480.1-201ENST00000451731 511 ntBASIC13.35□□□□□ -0.27
CD3DP04234 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC13.35□□□□□ -0.27
CD3DP04234 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC13.35□□□□□ -0.27
CD3DP04234 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC13.35□□□□□ -0.27
CD3DP04234 CXCL1P1-201ENST00000502804 216 ntBASIC13.35□□□□□ -0.27
CD3DP04234 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC13.35□□□□□ -0.27
CD3DP04234 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC13.35□□□□□ -0.27
CD3DP04234 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC13.35□□□□□ -0.27
CD3DP04234 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC13.35□□□□□ -0.27
CD3DP04234 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
CD3DP04234 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.35□□□□□ -0.27
CD3DP04234 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC13.35□□□□□ -0.27
CD3DP04234 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC13.35□□□□□ -0.27
CD3DP04234 MIR1199-201ENST00000621445 119 ntBASIC13.35□□□□□ -0.27
CD3DP04234 AC004790.2-201ENST00000623588 572 ntBASIC13.35□□□□□ -0.27
CD3DP04234 AL691432.1-201ENST00000596308 1422 ntBASIC13.35□□□□□ -0.27
CD3DP04234 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CD3DP04234 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CD3DP04234 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CD3DP04234 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CD3DP04234 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CD3DP04234 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CD3DP04234 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC13.35□□□□□ -0.27
CD3DP04234 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
CD3DP04234 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CD3DP04234 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
CD3DP04234 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.35□□□□□ -0.27
CD3DP04234 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC13.35□□□□□ -0.27
CD3DP04234 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
CD3DP04234 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.35□□□□□ -0.27
CD3DP04234 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD3DP04234 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD3DP04234 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD3DP04234 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD3DP04234 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD3DP04234 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD3DP04234 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC13.34□□□□□ -0.27
CD3DP04234 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD3DP04234 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
CD3DP04234 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
CD3DP04234 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.34□□□□□ -0.27
CD3DP04234 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
CD3DP04234 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD3DP04234 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD3DP04234 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
CD3DP04234 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
CD3DP04234 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CD3DP04234 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms