Protein–RNA interactions for Protein: P01891

HLA-A, HLA class I histocompatibility antigen, A-68 alpha chain, humanhuman

Known RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-AP01891 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
HLA-AP01891 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-AP01891 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
HLA-AP01891 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-AP01891 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.33□□□□□ -0.28
HLA-AP01891 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.33□□□□□ -0.28
HLA-AP01891 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC13.33□□□□□ -0.28
HLA-AP01891 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.33□□□□□ -0.28
HLA-AP01891 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
HLA-AP01891 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-AP01891 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.33□□□□□ -0.28
HLA-AP01891 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-AP01891 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-AP01891 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-AP01891 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-AP01891 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.33□□□□□ -0.28
HLA-AP01891 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
HLA-AP01891 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-AP01891 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC13.32□□□□□ -0.28
HLA-AP01891 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.32□□□□□ -0.28
HLA-AP01891 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-AP01891 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-AP01891 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.32□□□□□ -0.28
HLA-AP01891 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-AP01891 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC13.32□□□□□ -0.28
HLA-AP01891 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-AP01891 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-AP01891 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-AP01891 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-AP01891 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-AP01891 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-AP01891 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-AP01891 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.32□□□□□ -0.28
HLA-AP01891 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.32□□□□□ -0.28
HLA-AP01891 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-AP01891 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.32□□□□□ -0.28
HLA-AP01891 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-AP01891 HIST2H3DP1-201ENST00000401004 416 ntBASIC13.32□□□□□ -0.28
HLA-AP01891 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC13.32□□□□□ -0.28
HLA-AP01891 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC13.32□□□□□ -0.28
HLA-AP01891 AC079781.3-201ENST00000449110 356 ntBASIC13.32□□□□□ -0.28
HLA-AP01891 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC13.32□□□□□ -0.28
HLA-AP01891 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
HLA-AP01891 SCARNA2-201ENST00000458748 420 ntBASIC13.32□□□□□ -0.28
HLA-AP01891 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
HLA-AP01891 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC13.32□□□□□ -0.28
HLA-AP01891 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-AP01891 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.32□□□□□ -0.28
HLA-AP01891 MTDHP4-201ENST00000600287 670 ntBASIC13.32□□□□□ -0.28
HLA-AP01891 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
HLA-AP01891 TP73-AS1-207ENST00000624167 988 ntBASIC13.32□□□□□ -0.28
HLA-AP01891 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC13.32□□□□□ -0.28
HLA-AP01891 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC13.32□□□□□ -0.28
HLA-AP01891 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.32□□□□□ -0.28
HLA-AP01891 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
HLA-AP01891 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC13.32□□□□□ -0.28
HLA-AP01891 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.32□□□□□ -0.28
HLA-AP01891 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-AP01891 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-AP01891 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.32□□□□□ -0.28
HLA-AP01891 AC129492.6-201ENST00000611383 1305 ntBASIC13.32□□□□□ -0.28
HLA-AP01891 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-AP01891 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.32□□□□□ -0.28
HLA-AP01891 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-AP01891 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-AP01891 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-AP01891 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-AP01891 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.32□□□□□ -0.28
HLA-AP01891 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC13.32□□□□□ -0.28
HLA-AP01891 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-AP01891 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
HLA-AP01891 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
HLA-AP01891 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-AP01891 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.31□□□□□ -0.28
HLA-AP01891 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-AP01891 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.31□□□□□ -0.28
HLA-AP01891 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-AP01891 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
HLA-AP01891 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
HLA-AP01891 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-AP01891 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-AP01891 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-AP01891 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
HLA-AP01891 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-AP01891 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
HLA-AP01891 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-AP01891 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
HLA-AP01891 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
HLA-AP01891 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-AP01891 AC004870.1-201ENST00000315132 882 ntBASIC13.31□□□□□ -0.28
HLA-AP01891 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.31□□□□□ -0.28
HLA-AP01891 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC13.31□□□□□ -0.28
HLA-AP01891 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC13.31□□□□□ -0.28
HLA-AP01891 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
HLA-AP01891 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-AP01891 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC13.31□□□□□ -0.28
HLA-AP01891 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC13.31□□□□□ -0.28
HLA-AP01891 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC13.31□□□□□ -0.28
HLA-AP01891 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC13.31□□□□□ -0.28
HLA-AP01891 AC021087.4-201ENST00000563761 564 ntBASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms