Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NKX2-2O95096 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.44□□□□□ -0.1
NKX2-2O95096 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.44□□□□□ -0.1
NKX2-2O95096 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NKX2-2O95096 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
NKX2-2O95096 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.44□□□□□ -0.1
NKX2-2O95096 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.44□□□□□ -0.1
NKX2-2O95096 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC14.44□□□□□ -0.1
NKX2-2O95096 RASL12-203ENST00000434605 982 ntTSL 2 BASIC14.44□□□□□ -0.1
NKX2-2O95096 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NKX2-2O95096 MEIS3P1-201ENST00000495167 958 ntBASIC14.44□□□□□ -0.1
NKX2-2O95096 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.44□□□□□ -0.1
NKX2-2O95096 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
NKX2-2O95096 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.44□□□□□ -0.1
NKX2-2O95096 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.44□□□□□ -0.1
NKX2-2O95096 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.44□□□□□ -0.1
NKX2-2O95096 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.44□□□□□ -0.1
NKX2-2O95096 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
NKX2-2O95096 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NKX2-2O95096 AC006058.4-201ENST00000624016 1670 ntBASIC14.44□□□□□ -0.1
NKX2-2O95096 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NKX2-2O95096 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NKX2-2O95096 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
NKX2-2O95096 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NKX2-2O95096 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.44□□□□□ -0.1
NKX2-2O95096 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.44□□□□□ -0.1
NKX2-2O95096 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NKX2-2O95096 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
NKX2-2O95096 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NKX2-2O95096 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NKX2-2O95096 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
NKX2-2O95096 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC14.44□□□□□ -0.1
NKX2-2O95096 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.44□□□□□ -0.1
NKX2-2O95096 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
NKX2-2O95096 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NKX2-2O95096 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
NKX2-2O95096 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
NKX2-2O95096 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-2O95096 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
NKX2-2O95096 FER1L4-210ENST00000615531 5998 ntBASIC14.43□□□□□ -0.1
NKX2-2O95096 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.43□□□□□ -0.1
NKX2-2O95096 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-2O95096 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.43□□□□□ -0.1
NKX2-2O95096 AC144831.1-201ENST00000573312 2656 ntBASIC14.43□□□□□ -0.1
NKX2-2O95096 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.43□□□□□ -0.1
NKX2-2O95096 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-2O95096 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-2O95096 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-2O95096 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC14.43□□□□□ -0.1
NKX2-2O95096 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-2O95096 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
NKX2-2O95096 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.43□□□□□ -0.1
NKX2-2O95096 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
NKX2-2O95096 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-2O95096 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-2O95096 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-2O95096 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-2O95096 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-2O95096 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-2O95096 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.43□□□□□ -0.1
NKX2-2O95096 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC14.43□□□□□ -0.1
NKX2-2O95096 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC14.43□□□□□ -0.1
NKX2-2O95096 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.43□□□□□ -0.1
NKX2-2O95096 SPDYE18-201ENST00000510091 1050 ntBASIC14.43□□□□□ -0.1
NKX2-2O95096 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.43□□□□□ -0.1
NKX2-2O95096 ARL16-202ENST00000570561 768 ntTSL 2 BASIC14.43□□□□□ -0.1
NKX2-2O95096 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC14.43□□□□□ -0.1
NKX2-2O95096 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.43□□□□□ -0.1
NKX2-2O95096 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-2O95096 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.43□□□□□ -0.1
NKX2-2O95096 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
NKX2-2O95096 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC14.43□□□□□ -0.1
NKX2-2O95096 AL391069.4-201ENST00000609583 481 ntBASIC14.43□□□□□ -0.1
NKX2-2O95096 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC14.43□□□□□ -0.1
NKX2-2O95096 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.43□□□□□ -0.1
NKX2-2O95096 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
NKX2-2O95096 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-2O95096 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-2O95096 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
NKX2-2O95096 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-2O95096 AC023024.2-201ENST00000623561 1993 ntBASIC14.43□□□□□ -0.1
NKX2-2O95096 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-2O95096 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.43□□□□□ -0.1
NKX2-2O95096 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-2O95096 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-2O95096 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NKX2-2O95096 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.43□□□□□ -0.1
NKX2-2O95096 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-2O95096 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-2O95096 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-2O95096 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-2O95096 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-2O95096 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
NKX2-2O95096 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-2O95096 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
NKX2-2O95096 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.42□□□□□ -0.1
NKX2-2O95096 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-2O95096 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-2O95096 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NKX2-2O95096 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms