Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
GPC4O75487 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GPC4O75487 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GPC4O75487 AC023157.3-201ENST00000619086 2088 ntBASIC15.8■□□□□ 0.12
GPC4O75487 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
GPC4O75487 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
GPC4O75487 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GPC4O75487 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC15.8■□□□□ 0.12
GPC4O75487 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
GPC4O75487 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
GPC4O75487 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC15.8■□□□□ 0.12
GPC4O75487 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GPC4O75487 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
GPC4O75487 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
GPC4O75487 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GPC4O75487 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
GPC4O75487 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
GPC4O75487 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
GPC4O75487 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.79■□□□□ 0.12
GPC4O75487 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
GPC4O75487 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GPC4O75487 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
GPC4O75487 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
GPC4O75487 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GPC4O75487 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GPC4O75487 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GPC4O75487 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GPC4O75487 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
GPC4O75487 AC011477.6-201ENST00000604980 1927 ntBASIC15.79■□□□□ 0.12
GPC4O75487 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
GPC4O75487 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
GPC4O75487 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GPC4O75487 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GPC4O75487 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
GPC4O75487 AC004987.2-201ENST00000395959 1148 ntBASIC15.79■□□□□ 0.12
GPC4O75487 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC15.79■□□□□ 0.12
GPC4O75487 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
GPC4O75487 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC15.79■□□□□ 0.12
GPC4O75487 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.79■□□□□ 0.12
GPC4O75487 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.79■□□□□ 0.12
GPC4O75487 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.79■□□□□ 0.12
GPC4O75487 AC015911.4-201ENST00000588022 1070 ntBASIC15.79■□□□□ 0.12
GPC4O75487 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
GPC4O75487 AC003101.2-201ENST00000612557 442 ntBASIC15.79■□□□□ 0.12
GPC4O75487 MIR6080-201ENST00000617359 66 ntBASIC15.79■□□□□ 0.12
GPC4O75487 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
GPC4O75487 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GPC4O75487 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GPC4O75487 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
GPC4O75487 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GPC4O75487 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GPC4O75487 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
GPC4O75487 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GPC4O75487 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
GPC4O75487 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
GPC4O75487 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.79■□□□□ 0.12
GPC4O75487 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
GPC4O75487 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
GPC4O75487 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
GPC4O75487 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.78■□□□□ 0.12
GPC4O75487 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
GPC4O75487 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GPC4O75487 AC134407.2-201ENST00000625089 1978 ntBASIC15.78■□□□□ 0.12
GPC4O75487 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
GPC4O75487 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GPC4O75487 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.78■□□□□ 0.12
GPC4O75487 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GPC4O75487 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.78■□□□□ 0.12
GPC4O75487 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC15.78■□□□□ 0.12
GPC4O75487 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
GPC4O75487 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GPC4O75487 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.78■□□□□ 0.12
GPC4O75487 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GPC4O75487 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
GPC4O75487 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GPC4O75487 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
GPC4O75487 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
GPC4O75487 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.78■□□□□ 0.12
GPC4O75487 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.78■□□□□ 0.12
GPC4O75487 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
GPC4O75487 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.78■□□□□ 0.12
GPC4O75487 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.78■□□□□ 0.12
GPC4O75487 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GPC4O75487 AL133215.2-201ENST00000609242 977 ntBASIC15.78■□□□□ 0.12
GPC4O75487 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.78■□□□□ 0.12
GPC4O75487 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GPC4O75487 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GPC4O75487 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GPC4O75487 AC099063.4-201ENST00000641099 1602 ntBASIC15.78■□□□□ 0.12
GPC4O75487 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
GPC4O75487 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
GPC4O75487 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
GPC4O75487 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
GPC4O75487 BNIP3P1-202ENST00000550043 1585 ntBASIC15.78■□□□□ 0.12
GPC4O75487 CYP4F24P-201ENST00000586049 1580 ntBASIC15.78■□□□□ 0.12
GPC4O75487 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
GPC4O75487 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
GPC4O75487 AC136621.1-201ENST00000624017 2304 ntBASIC15.78■□□□□ 0.12
GPC4O75487 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
GPC4O75487 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms