Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
OPHN1O60890 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
OPHN1O60890 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
OPHN1O60890 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
OPHN1O60890 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
OPHN1O60890 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
OPHN1O60890 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
OPHN1O60890 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
OPHN1O60890 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
OPHN1O60890 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.45■□□□□ 0.22
OPHN1O60890 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
OPHN1O60890 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
OPHN1O60890 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
OPHN1O60890 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
OPHN1O60890 CU639417.3-201ENST00000624240 1404 ntBASIC16.45■□□□□ 0.22
OPHN1O60890 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
OPHN1O60890 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
OPHN1O60890 AC099063.4-201ENST00000641099 1602 ntBASIC16.45■□□□□ 0.22
OPHN1O60890 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
OPHN1O60890 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
OPHN1O60890 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
OPHN1O60890 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.45■□□□□ 0.22
OPHN1O60890 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
OPHN1O60890 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
OPHN1O60890 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
OPHN1O60890 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC16.45■□□□□ 0.22
OPHN1O60890 ATP5G2P4-201ENST00000442175 420 ntBASIC16.45■□□□□ 0.22
OPHN1O60890 EHF-205ENST00000527935 557 ntTSL 2 BASIC16.45■□□□□ 0.22
OPHN1O60890 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC16.45■□□□□ 0.22
OPHN1O60890 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.45■□□□□ 0.22
OPHN1O60890 SRP9-204ENST00000619790 377 ntTSL 2 BASIC16.45■□□□□ 0.22
OPHN1O60890 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
OPHN1O60890 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC16.45■□□□□ 0.22
OPHN1O60890 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC16.45■□□□□ 0.22
OPHN1O60890 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
OPHN1O60890 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
OPHN1O60890 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
OPHN1O60890 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
OPHN1O60890 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
OPHN1O60890 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
OPHN1O60890 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
OPHN1O60890 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
OPHN1O60890 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
OPHN1O60890 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16.44■□□□□ 0.22
OPHN1O60890 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
OPHN1O60890 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
OPHN1O60890 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
OPHN1O60890 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
OPHN1O60890 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
OPHN1O60890 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
OPHN1O60890 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
OPHN1O60890 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
OPHN1O60890 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
OPHN1O60890 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
OPHN1O60890 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
OPHN1O60890 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC16.44■□□□□ 0.22
OPHN1O60890 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
OPHN1O60890 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
OPHN1O60890 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.44■□□□□ 0.22
OPHN1O60890 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.44■□□□□ 0.22
OPHN1O60890 HLA-H-201ENST00000383620 1096 ntBASIC16.44■□□□□ 0.22
OPHN1O60890 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC16.44■□□□□ 0.22
OPHN1O60890 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.44■□□□□ 0.22
OPHN1O60890 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
OPHN1O60890 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.44■□□□□ 0.22
OPHN1O60890 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.44■□□□□ 0.22
OPHN1O60890 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC16.44■□□□□ 0.22
OPHN1O60890 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.44■□□□□ 0.22
OPHN1O60890 AC003101.2-201ENST00000612557 442 ntBASIC16.44■□□□□ 0.22
OPHN1O60890 AC018529.1-201ENST00000613063 361 ntBASIC16.44■□□□□ 0.22
OPHN1O60890 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
OPHN1O60890 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
OPHN1O60890 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC16.44■□□□□ 0.22
OPHN1O60890 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.44■□□□□ 0.22
OPHN1O60890 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.44■□□□□ 0.22
OPHN1O60890 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
OPHN1O60890 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
OPHN1O60890 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
OPHN1O60890 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.44■□□□□ 0.22
OPHN1O60890 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.44■□□□□ 0.22
OPHN1O60890 SBF1P1-201ENST00000444527 5631 ntBASIC16.44■□□□□ 0.22
OPHN1O60890 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
OPHN1O60890 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.44■□□□□ 0.22
OPHN1O60890 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
OPHN1O60890 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.44■□□□□ 0.22
OPHN1O60890 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
OPHN1O60890 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
OPHN1O60890 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
OPHN1O60890 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
OPHN1O60890 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.43■□□□□ 0.22
OPHN1O60890 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
OPHN1O60890 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
OPHN1O60890 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
OPHN1O60890 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC16.43■□□□□ 0.22
OPHN1O60890 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
OPHN1O60890 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC16.43■□□□□ 0.22
OPHN1O60890 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.43■□□□□ 0.22
OPHN1O60890 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
OPHN1O60890 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC16.43■□□□□ 0.22
OPHN1O60890 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms