Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.32□□□□□ -0.12
NPIPA3F8WFD2 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPA3F8WFD2 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPA3F8WFD2 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPA3F8WFD2 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPA3F8WFD2 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPA3F8WFD2 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPA3F8WFD2 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
NPIPA3F8WFD2 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
NPIPA3F8WFD2 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
NPIPA3F8WFD2 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPA3F8WFD2 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPA3F8WFD2 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
NPIPA3F8WFD2 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
NPIPA3F8WFD2 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC14.31□□□□□ -0.12
NPIPA3F8WFD2 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
NPIPA3F8WFD2 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA3F8WFD2 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA3F8WFD2 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA3F8WFD2 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.31□□□□□ -0.12
NPIPA3F8WFD2 AC011477.6-201ENST00000604980 1927 ntBASIC14.31□□□□□ -0.12
NPIPA3F8WFD2 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA3F8WFD2 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA3F8WFD2 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.31□□□□□ -0.12
NPIPA3F8WFD2 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA3F8WFD2 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.31□□□□□ -0.12
NPIPA3F8WFD2 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.31□□□□□ -0.12
NPIPA3F8WFD2 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA3F8WFD2 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
NPIPA3F8WFD2 Z97205.2-201ENST00000564697 1639 ntBASIC14.31□□□□□ -0.12
NPIPA3F8WFD2 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA3F8WFD2 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA3F8WFD2 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.31□□□□□ -0.12
NPIPA3F8WFD2 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA3F8WFD2 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA3F8WFD2 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA3F8WFD2 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA3F8WFD2 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
NPIPA3F8WFD2 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.31□□□□□ -0.12
NPIPA3F8WFD2 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.31□□□□□ -0.12
NPIPA3F8WFD2 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.31□□□□□ -0.12
NPIPA3F8WFD2 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
NPIPA3F8WFD2 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.31□□□□□ -0.12
NPIPA3F8WFD2 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
NPIPA3F8WFD2 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
NPIPA3F8WFD2 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA3F8WFD2 RARRES2P5-201ENST00000564013 466 ntBASIC14.31□□□□□ -0.12
NPIPA3F8WFD2 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.31□□□□□ -0.12
NPIPA3F8WFD2 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.31□□□□□ -0.12
NPIPA3F8WFD2 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA3F8WFD2 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC14.31□□□□□ -0.12
NPIPA3F8WFD2 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA3F8WFD2 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA3F8WFD2 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
NPIPA3F8WFD2 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA3F8WFD2 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA3F8WFD2 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.31□□□□□ -0.12
NPIPA3F8WFD2 AC112504.1-201ENST00000623415 1841 ntBASIC14.31□□□□□ -0.12
NPIPA3F8WFD2 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA3F8WFD2 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA3F8WFD2 DEK-201ENST00000244776 1441 ntTSL 2 BASIC14.31□□□□□ -0.12
NPIPA3F8WFD2 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.31□□□□□ -0.12
NPIPA3F8WFD2 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.31□□□□□ -0.12
NPIPA3F8WFD2 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC14.31□□□□□ -0.12
NPIPA3F8WFD2 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
NPIPA3F8WFD2 PCDHA3-202ENST00000532566 4594 ntBASIC14.31□□□□□ -0.12
NPIPA3F8WFD2 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA3F8WFD2 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA3F8WFD2 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.3□□□□□ -0.12
NPIPA3F8WFD2 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.3□□□□□ -0.12
NPIPA3F8WFD2 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA3F8WFD2 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.3□□□□□ -0.12
NPIPA3F8WFD2 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.3□□□□□ -0.12
NPIPA3F8WFD2 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA3F8WFD2 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA3F8WFD2 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA3F8WFD2 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.3□□□□□ -0.12
NPIPA3F8WFD2 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
NPIPA3F8WFD2 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
NPIPA3F8WFD2 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA3F8WFD2 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
NPIPA3F8WFD2 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA3F8WFD2 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA3F8WFD2 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
NPIPA3F8WFD2 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.3□□□□□ -0.12
NPIPA3F8WFD2 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA3F8WFD2 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
NPIPA3F8WFD2 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.3□□□□□ -0.12
NPIPA3F8WFD2 RN7SL837P-201ENST00000463010 287 ntBASIC14.3□□□□□ -0.12
NPIPA3F8WFD2 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC14.3□□□□□ -0.12
NPIPA3F8WFD2 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC14.3□□□□□ -0.12
NPIPA3F8WFD2 IGHV3-71-201ENST00000523324 359 ntBASIC14.3□□□□□ -0.12
NPIPA3F8WFD2 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.3□□□□□ -0.12
NPIPA3F8WFD2 HILS1-202ENST00000545329 423 ntBASIC14.3□□□□□ -0.12
NPIPA3F8WFD2 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
NPIPA3F8WFD2 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC14.3□□□□□ -0.12
NPIPA3F8WFD2 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC14.3□□□□□ -0.12
NPIPA3F8WFD2 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
NPIPA3F8WFD2 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.3□□□□□ -0.12
NPIPA3F8WFD2 RRP7BP-205ENST00000566851 833 ntBASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms